Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1477 ATGTCGTTTACAATACAGGGGCCAGATTCTGGTGCACGCGCCTTCACAAGATTAAAGTTGACCGAGCGGGAAAACCCGGAAGCACGAAGCCAGGTCCCGTGGGTACGTGACACGCGCCACACGTGCAACGCGAGTGACCCTCGCGTGAGAATTTTCAGTTTCAGATCACCACGCGGAGCAGACCTCGTCTATAATCTTCTTCTTTTATGTAATCACAGAGGTACCCTTGAATATATCAGGCAGAAAACTGTTGTTCTGATCATGGATATAGATCTTAGGTTACCCTCTGGTGAGCATGATAAAGAGGATGAAGAACCGAATACAATTGATAACATATTGGATGGTGAAGAAAAATTGCATAATGTAGATATAGAAGGCAGAAATATAGTTGATGCTGGTGTTGAGGTACATGCTCTGGATGGTGGCAATTTGAATTCACCGACACTAGATATGGTAATGTTTAAGGAAGATACAAATCTTGAGCCACTTTCTGGCATGGAATTTGAGTCTCATGGGGATGCTTATTCTTTCTACCAAGAGTATGCTAGGTCTATGGGATTCAATACTGCAATTCAAAATAGTCGGCGTTCAAAAACATCAAGAGAATTTATAGATGCAAAGTTTGCTTGTTCCAGATATGGAACAAAACGGGAATACGACAACAAATCATTCAATAGACCAAGAGCAAGACAGAACAAGCAAGAGTCTGAAAATTCAACTGGTCGGAGATCTTGTTCAAAGACTGATTGTAAAGCAAGCATGCATGTAAAAAGGAGGTCAGATGGAAAATGGGTTATACATAGCTTTGTGAAGGAGCATAATCATGAGCTTTTACCAGCCCAAGCTGTAAGTGAACAAGCAAGGAAAATGTACGCTGCAATGGCTAGACAGTTTGCTGAATACAAAACTGTAGTCGGTCTAAAGAATGACAAAAACCCATTTGATAAGGGTCGGAATTTAGGCCTGGAGACAGGGGATGCCAAACTTCTGCTTGATTTTTTTATACAGATGCAAAATATGAATTCTAACTTCTTTTATGCTGTAGATCTTGGTGAGGATCAAAGGGTGAAAAACCTTTTATGGGTAGATGCTAAATGTAGGCATGACTACATCAACTTTTGCGATGTAGTGTCTTTTGACACCACCTATGTTAGAAACAAATATAAGATGCCTCTTGCAATTTTTGTTGGAGTGAATCAGCATTATCAATTTATATTGCTTGGGTGTGCCCTAATATCAGATGAAACTGCTACAACTTGGTCTTGGCTGATGCAGACATGGCTGAAAGCAGTTGGAGGTCAAGTTCCAAAAGTGATAATTACTGATCATGACAAGACATTGAAGTCAGTTATTTCAGATGTCTTTCCTAATGCTCATCATTGTGTGTGCCTATGGCACATATTGGGTAAGGTATCTGAAAATTTGGGTCATGTCATTAAGCGACATGATAAATTGATGGCAAAATTTGAAAAATGCATCTATAGGTCATGGACGAGTGATGAGTTTGAGAAGAGGTGGTGGAAAATTGTTGATAGGTTTGAACTCCGAGAGGATGAATGCATGCAGACATTGTATGAAGATTGCAAGTTATGGGCACCAACATTCATGAGGGATGTATGTTTAGGTGGTATGTCAACTGTCCAGCGATCTGAAAGTGTAAATTCCTTTTTTGATAAATATGTCCACAAGAAGACCTCTGTACAAGATTTCATCAGACAGTATGAATCAATATTGCAAGAAAGGTATGAAGAAGAAGCAAAAGCAGATTCTGATACTTGGAATAAAGTGGCAGCATTAAAAACTCCTTCACCTTTAGAGAAGAGTGTTGCAGGAATATACACACATGCAGTATTTAAGAAGATTCAGGTTGAGGTTATTGGTGCAGTTGCTTGTCACCCTAAAGCTGAAAGACAGGATGATGCAAGCATTACATACAAGGTTCATGATATGGAAAGGAATCAAGACTTCATGGTTGTGTTGAATGAATTAAAATCAGAGGTGTCTTGTATATGTCGATTATTTGAATATAGAGGTTATCTTTGTCGACATGCATTGGTTGTTCTTCAATATTCTCGCCTTTCGGCAATCCCATCTCAATATATTTTGAAACGGTGGACAAAAGATGCAAAGTCCAGGCATTTATCGGGAGAGGAATCTGAACATATGCTGGCAAGGGTGCAACGGTACAATGATTTATGTCAGCGAGCACTTAAACTGAGTGAAGAGGGGTCACTGTCTCAAGAGAGTTATAGTATTGCATTCCATGGACTACATGATGCATATGCAAGTTGTGTAAGTGTCAACAATTCTAATAAAGATCCTATAGAAGCAGGCACATCAGCTGGTCATGGTCAGCTTTCCACTGAAGAAGATACCCAGAGTAAAAGTATGGGCAAGACGAACAAAAAGAAGAATCCAGCTAAAAAGAAAAAGATGAACTCTGATGCTGAAGTGATGACTGTTGGGGCACAAGACAACTTGCAACAGATGGACAAGTTCAGCGCAAGGGCAGTAACCCTTGATGGTTATTATGGCACTCAACAGAGTGTGCAGGGAATGTTAAACTTGATGGGACCAACTCGTGATAATTACTATGGGAATCAACAGACTATTCAGGGGCTGGGACAATTAAGTTCCATACCACCAAGCCACGACGGTTATTACAGTGCTCATCAGAGCATGCCTGGTCTGGCACAACTGGATTTTTTCCGAGCATCAACAGGTTTTACATATGGCATTCGGGATGATCCTAGCGTAAGAGCTCCACAGTTGCATGAGGATCCATCAAGACATGCATGA 2799 0.4051 MSFTIQGPDSGARAFTRLKLTERENPEARSQVPWVRDTRHTCNASDPRVRIFSFRSPRGADLVYNLLLLCNHRGTLEYIRQKTVVLIMDIDLRLPSGEHDKEDEEPNTIDNILDGEEKLHNVDIEGRNIVDAGVEVHALDGGNLNSPTLDMVMFKEDTNLEPLSGMEFESHGDAYSFYQEYARSMGFNTAIQNSRRSKTSREFIDAKFACSRYGTKREYDNKSFNRPRARQNKQESENSTGRRSCSKTDCKASMHVKRRSDGKWVIHSFVKEHNHELLPAQAVSEQARKMYAAMARQFAEYKTVVGLKNDKNPFDKGRNLGLETGDAKLLLDFFIQMQNMNSNFFYAVDLGEDQRVKNLLWVDAKCRHDYINFCDVVSFDTTYVRNKYKMPLAIFVGVNQHYQFILLGCALISDETATTWSWLMQTWLKAVGGQVPKVIITDHDKTLKSVISDVFPNAHHCVCLWHILGKVSENLGHVIKRHDKLMAKFEKCIYRSWTSDEFEKRWWKIVDRFELREDECMQTLYEDCKLWAPTFMRDVCLGGMSTVQRSESVNSFFDKYVHKKTSVQDFIRQYESILQERYEEEAKADSDTWNKVAALKTPSPLEKSVAGIYTHAVFKKIQVEVIGAVACHPKAERQDDASITYKVHDMERNQDFMVVLNELKSEVSCICRLFEYRGYLCRHALVVLQYSRLSAIPSQYILKRWTKDAKSRHLSGEESEHMLARVQRYNDLCQRALKLSEEGSLSQESYSIAFHGLHDAYASCVSVNNSNKDPIEAGTSAGHGQLSTEEDTQSKSMGKTNKKKNPAKKKKMNSDAEVMTVGAQDNLQQMDKFSARAVTLDGYYGTQQSVQGMLNLMGPTRDNYYGNQQTIQGLGQLSSIPPSHDGYYSAHQSMPGLAQLDFFRASTGFTYGIRDDPSVRAPQLHEDPSRHA 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1477 932 MobiDBLite consensus disorder prediction 775 794 - -
Dere07g1477 932 SMART 26again6 667 694 IPR006564 GO:0008270
Dere07g1477 932 MobiDBLite consensus disorder prediction 775 816 - -
Dere07g1477 932 MobiDBLite consensus disorder prediction 219 252 - -
Dere07g1477 932 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 155 763 IPR031052 GO:0006355
Dere07g1477 932 Pfam FAR1 DNA-binding domain 176 279 IPR004330 -
Dere07g1477 932 Pfam MULE transposase domain 376 468 IPR018289 -
Dere07g1477 932 Pfam SWIM zinc finger 663 690 IPR007527 GO:0008270
Dere07g1477 932 ProSiteProfiles Zinc finger SWIM-type profile. 656 692 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1477 Dere-ChrDere07 19604783 19613916 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Dere07g1477 FAR1 4.8e-27 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g1636 08 21863699 21872039 Dere07g1477 07 19604783 19613916 CCT
Dere07g1477 07 19604783 19613916 Dere07g1477 07 19604783 19613916 ECH