Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1475 ATGGAAGACGATGGTGATTACAGATCAGACGTTTCAGATATAATACGTAGCAATCAACAGAGGAAGAAGCAGTCTTTTATTCGGAAGATTTTCGCCATGAGGGAGAGAAATGGAAGTGCGACAGGTGGAGTTTCAGTTGATTCCCTTGAAGCATTGTCTGACTCATCCATTGAAAATAAATATTTTAGCTGCTCAGATCCTCCTATGTCATTTGGTGAAGATATTCAGAATTTAAGAGTGTTTGTAGCAACATGGAATGTAGGAGGGCAATGTCCTAATGGGAACCTAGACTTGAGTGATTTTCTTCAGGTCAGAAATGAACCTGATATATATGTCTTGGGGTTTCAGGAAATAGTCCCCTTAAATGCAGGAAATGTGCTGGTGTCAGGGGATAATGAGCCTGCTGCTAAATGGCTTGCTTTGATAAATCAGTCACTCAATGGGCCCTCTGATTTAGCTTCAAAGGGACTAAAACCCACTGCATCATTTGGAGGGTCATTATTCTTCCAAAAGCCTACTTATAGGAAGATTAAGAAAACTTTCAAAACACTAAATGGAAGGAGGCTAAAGAGTTGTAACTGTATTCTTGATATGGAAAGGAAGGCTGCCAAGGAATTCTGTTTTCTGTGCCAAGAACCAAATTTAAACGTTGATGATTCTTCCTCTGAAGAGGACGATGACAGTTACCAAACTTCTTTTTCTATGGCCACTAACAAGAATATGAAGTACAGTCTTGTTGCCAGCAAGCAAATGGTTGGAATTTTTGTTAGTGTCTGGATGAAGAAGGAACTTGTTCAACATGTTGGCCATTTGAGAATATGTTGCACTAGTCGTGGGATCATGGGTTGCCTTGGAAACAAGGGGTGTATATCTGTGAGCATGTCTTTGTACCAGACAACATTTTGCTTTATTTGTAGTCATTTGGCATCTGGAGAGAAAGAGGGTGATGAACTTCGGAGAAATCTTGATGTCATAGAGATTTTGAAAAACACTCAGTTTCCAAGGATTTGCAAGACATCATATAGTAGGATGCCTGACAGAATTTTAGATCACGATCGGGTCATATGGCTTGGGGACTTAAACTACCGAATTGCTTTATGCTACGATGATGCGAAAAAGCTTGTGCAAAGGAAGGATTGGCCTGCACTTTTTGACAAGGATCAGCTTCAGATGGAAAGGGAAGCGGGTCGTATATTTAAGGGTTGGAAAGAGGGAAAGATCTACTTTGCACCTACTTATAAATATTGCTTCAACTCAGACACTTACTATGCTGAAGGTGTGAAGGTTTCCAAAAACAAAAGGAGAACTCCAGCTTGGTGCGATAGAATTCTGTGGCGTGGAAGGGGAATACAGCAACGTTCTTATGAGCGCAAGGAATTAACGTTCTCTGATCATCGGCCTGTTTGTGCGACATTTTTGGTAGAAGTTGAGGTTATGTTCAGGAGACACAAGAAGAAAGTTCATACTTTCAACTTTCAGATTGAAGATCTTGAAACCACAAGAAGAGCATATTTTTCTTGA 1521 0.403 MEDDGDYRSDVSDIIRSNQQRKKQSFIRKIFAMRERNGSATGGVSVDSLEALSDSSIENKYFSCSDPPMSFGEDIQNLRVFVATWNVGGQCPNGNLDLSDFLQVRNEPDIYVLGFQEIVPLNAGNVLVSGDNEPAAKWLALINQSLNGPSDLASKGLKPTASFGGSLFFQKPTYRKIKKTFKTLNGRRLKSCNCILDMERKAAKEFCFLCQEPNLNVDDSSSEEDDDSYQTSFSMATNKNMKYSLVASKQMVGIFVSVWMKKELVQHVGHLRICCTSRGIMGCLGNKGCISVSMSLYQTTFCFICSHLASGEKEGDELRRNLDVIEILKNTQFPRICKTSYSRMPDRILDHDRVIWLGDLNYRIALCYDDAKKLVQRKDWPALFDKDQLQMEREAGRIFKGWKEGKIYFAPTYKYCFNSDTYYAEGVKVSKNKRRTPAWCDRILWRGRGIQQRSYERKELTFSDHRPVCATFLVEVEVMFRRHKKKVHTFNFQIEDLETTRRAYFS 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1475 506 SMART i5p_5 76 480 IPR000300 GO:0016791|GO:0046856
Dere07g1475 506 Pfam Endonuclease/Exonuclease/phosphatase family 83 465 IPR005135 GO:0003824
Dere07g1475 506 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 56 492 IPR045849 GO:0004445
Dere07g1475 506 SUPERFAMILY DNase I-like 70 489 IPR036691 -
Dere07g1475 506 Gene3D Endonuclease/exonuclease/phosphatase 70 502 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1475 Dere-ChrDere07 19574281 19578833 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1475 243 486 Acyl Lipid Metabolism Gene Families AT2G43900 28.975 3.48e-31 126