Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1472 ATGACCAAGAGCAGCATTGCGAACGCACTGGCAATGCCATTAAAGAATGTGACAGAGCTGTACAGTGTGTCGCTTGGGTTGGTCATTCAGGCTCTGAACCGAAACCTCAAGAAACAGAAGGTTGGCAAACGTGGTCTTCCTACTAATGGTTCCAAGGTCAGGCAGCCACTTCAGAAGCTCATCAAATTTTTGAGGGGGAAGTATGGCTGCAACAAATCATCAAACTGCCCTAGAAACGAAAGGCTTCTGATAGAAAGCGAACAGAAAGGGATTCTGCTGAATGAGTTTGTGATTGTGAGCCCTTACGGCACAGACAACTTCACCTCCATCGGAGACGCCATTGCTGCTGCTCCGAGCTTCACAAACCCTCAAGATGGCTACTTCCTCATATACGCAAAAGAAGGACTCTACGAGGAGTACGTTGTCGTGCCCAAAGAGAAAAGTAACATCTTGCTCATCGGAGATGGCATCAATCGCACTGTCATCACAGGGAATCACAATGTGGTGGATGGTTGGACGACCTTCAATTCTTCCACTTTTGGTACGTAG 549 0.4754 MTKSSIANALAMPLKNVTELYSVSLGLVIQALNRNLKKQKVGKRGLPTNGSKVRQPLQKLIKFLRGKYGCNKSSNCPRNERLLIESEQKGILLNEFVIVSPYGTDNFTSIGDAIAAAPSFTNPQDGYFLIYAKEGLYEEYVVVPKEKSNILLIGDGINRTVITGNHNVVDGWTTFNSSTFGT 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1472 182 Gene3D - 93 182 IPR012334 -
Dere07g1472 182 PANTHER PECTINESTERASE 14 181 - -
Dere07g1472 182 SUPERFAMILY Pectin lyase-like 95 180 IPR011050 -
Dere07g1472 182 Pfam Pectinesterase 97 181 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1472 Dere-ChrDere07 19497640 19500052 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1472 3 181 Carbohydrate Esterase AT3G10720 55.738 4.72e-60 195