Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1470 ATGCAAGGAGGGTCGGGTCAAAACTCAAATCCTCCTTCAGGATCCATTGATAAGTCAAGGATTTTAGATGTTAAACCTCTGCGTAGTTTGGAACCTGTTTTCCCAAATTCAGCTCAAGCTCCATCCTTTGATGGCAACTGCCCCTCTGGGTTTTATCCCTTCTTCCCATTTGGTGGACCTCAAGGACCTCAAGCATCACCTCCTAGGATTCCCATGCCAACTCCAATACGGTCATTTAGAAGCCCGGAAGCGGTAGAAGCAACCCCGTCTGACTTTCCCGGGACATCCAATGGAGATTTTACTGATAGCCAAAATCGTGCAGCACCAAACAGATCCAGATCCTCTCAAAAGAGGGCTAAGAAAAGTCTAGATCTACAAGTTGATGGGAGTTCTTTAATAGGTATTAGCACAAATGAACGTACAGATGGTAATCGGGAAGCGGTTAATCTCGTACTCATGACATTTGATGCACTTAGGAGAAGGCTGAGCCAACTTGAAGATGCCAAGGAATTGACGCCAGGGTTAATCAAGCGTGCCGATATGAAAGCTGGCAATGTTTTGATGAGTACAGGGATTCGAACAAACATGAGGAAAAGAATAGGAGCAGTGCCTGGGGTTGAGATTGGGGACATTTTCTATTTCCGACTAGAATTATGTGTCGTGGGGTTGCATAGTCAGTCTATGGGTGGGATTGACTATACAACTATGAAGGGTGAGAATGGGGATGAGCCTGTGGCGTTAGGCATTGTTTCAGCAGGAAAATATAATGACAATACAGAGGATAGTGATATTTTGATCTATAGTGGTCAGGGTGGGGAGAAGGGGTATGATCAGAAGCTAGAAAGGGGTAACCTTGCTTTGGATAGAAGCATGCGATGGAAGAATGAAGTAAGAGTCATCCGGGGCATGAAAGATCCTGTGAATCCAACTTCAAAGGTCTATCTCTATGATGGGCTGTATAAGATCCAGGATTCATGGATAGAAAAGGGTAAATCTGGTGGTGGTGTATTTAAGTACAAGTTGGTGAGAGTGCAAGAACAGCCCAGTGCCTTTGCTGCTTGGAAATCTATTGAAAAATGGAAAGCCAGCATCACTTCTAGGACTGGACTCATTCTTGCAGACCTATCCTCTGGAGCTGAGAAAATTCCTGTATCGCTTGTCAATGATGTTGATGATGATAAGGCACCAGGTTACTTCACTTATCTCCATTCTCTCAGATATTCAAAATCCTCCATTGTTTCACAGCCTTCTGATTTTTGCAACTGTCACAAAGATTGTGTTCCTGGTGATTTGAACTGCTCTTGCATTCGGAGAAATGAAGGTGATTTTCCATATACTGGCAATGGCATTTTAGTCAGTCGGAAGCAATTGGTTCATGAATGTGGTTCCTCATGTCAATGTTTTCCTAACTGCAAAAATCAAGTATCCCAGACTGGATTAAAGTACCATATGGAAGTCTTTAAAACGAAGGATAGAGGATGGGGTCTTCGATCGTTGGATCCTATTCGTGCAGGTACGTTTATTTGTGAGTATGCAGGAGAAGTTATGGACAAAGCCAAGGTAGGTCAGAATGGAGATAATGATGAGTATATTTTTGATACAACCCGAATTTATCATCCATTCAAGTGGAACTATGAACCTAAGTTACTAGAAGAAGCAAATTCAAATGGCTCTAGTGAGAATTACAACACTCCATCTCCTCTAATTATTAGTGCCAAGAATGTCGGAAATGTGGCTAGATTCATGAATCACAGTTGCTCCCCAAATGTTTTTTGGCAGCCAGTTTTGTATGAGGAAAACAATCAATCCTTCATCCATATTGCTTTTTTCGCCATTAGACACATTCCTCCACTGACAGAATTGACATATGATTATGGGATTGCCCATTCTGGTTCTACTGTGGGTAGCAGTGCACCCAAGTGGAGAAAGAAATGCTTATGCAGATCAACAAAATGCCAGGGTTCTTTTGGTTGA 1974 0.4255 MQGGSGQNSNPPSGSIDKSRILDVKPLRSLEPVFPNSAQAPSFDGNCPSGFYPFFPFGGPQGPQASPPRIPMPTPIRSFRSPEAVEATPSDFPGTSNGDFTDSQNRAAPNRSRSSQKRAKKSLDLQVDGSSLIGISTNERTDGNREAVNLVLMTFDALRRRLSQLEDAKELTPGLIKRADMKAGNVLMSTGIRTNMRKRIGAVPGVEIGDIFYFRLELCVVGLHSQSMGGIDYTTMKGENGDEPVALGIVSAGKYNDNTEDSDILIYSGQGGEKGYDQKLERGNLALDRSMRWKNEVRVIRGMKDPVNPTSKVYLYDGLYKIQDSWIEKGKSGGGVFKYKLVRVQEQPSAFAAWKSIEKWKASITSRTGLILADLSSGAEKIPVSLVNDVDDDKAPGYFTYLHSLRYSKSSIVSQPSDFCNCHKDCVPGDLNCSCIRRNEGDFPYTGNGILVSRKQLVHECGSSCQCFPNCKNQVSQTGLKYHMEVFKTKDRGWGLRSLDPIRAGTFICEYAGEVMDKAKVGQNGDNDEYIFDTTRIYHPFKWNYEPKLLEEANSNGSSENYNTPSPLIISAKNVGNVARFMNHSCSPNVFWQPVLYEENNQSFIHIAFFAIRHIPPLTELTYDYGIAHSGSTVGSSAPKWRKKCLCRSTKCQGSFG 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1470 657 ProSiteProfiles YDG domain profile. 201 343 IPR003105 -
Dere07g1470 657 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 97 652 - -
Dere07g1470 657 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 22 657 IPR025794 GO:0016571
Dere07g1470 657 MobiDBLite consensus disorder prediction 55 124 - -
Dere07g1470 657 Pfam SAD/SRA domain 200 347 IPR003105 -
Dere07g1470 657 FunFam Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 184 362 - -
Dere07g1470 657 SUPERFAMILY PUA domain-like 183 365 IPR015947 -
Dere07g1470 657 ProSiteProfiles Pre-SET domain profile. 418 479 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Dere07g1470 657 MobiDBLite consensus disorder prediction 90 112 - -
Dere07g1470 657 Pfam SET domain 493 626 IPR001214 GO:0005515
Dere07g1470 657 ProSiteProfiles SET domain profile. 482 626 IPR001214 GO:0005515
Dere07g1470 657 MobiDBLite consensus disorder prediction 60 75 - -
Dere07g1470 657 SUPERFAMILY SET domain 382 654 IPR046341 -
Dere07g1470 657 Pfam Pre-SET motif 376 473 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Dere07g1470 657 SMART G9a_1 196 347 IPR003105 -
Dere07g1470 657 SMART preset_2 372 466 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Dere07g1470 657 MobiDBLite consensus disorder prediction 1 16 - -
Dere07g1470 657 Gene3D - 184 364 IPR036987 -
Dere07g1470 657 MobiDBLite consensus disorder prediction 1 23 - -
Dere07g1470 657 SMART set_7 482 632 IPR001214 GO:0005515
Dere07g1470 657 Gene3D SET domain 365 656 IPR046341 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1470 Dere-ChrDere07 19461410 19463383 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1470 1 657 Su(var)3-9 homologs AT1G73100 52.762 0.0 701
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Dere07g1470 SAD_SRA 3.7e-44 CL0178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere08g1618 08 21534577 21536568 Dere07g1470 07 19461410 19463383 CCT
Dere07g1470 07 19461410 19463383 Dere07g1470 07 19461410 19463383 ECH