Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1465 ATGATAATGTCTGAAGAAGCAGAGAGGATAGTGATGATCCAGGATGCAGCGAGAGATGCGAATACGATGGCGATCAAATGGACCCTGCAGGTGCTATCGCTTGGGCCCGGAGATGAGGTTACGCTACTTGCAATTCTTCGCCACTCTACCATGTTTCCTTTCCTTGGTCCTGCGAAACTGCAACAGAGAACTGTCATGGAAGAAATTGGTAAGAGGAAGGAAGAGTACCGAAACAATGCAGAGATTATGAAAGTCTCTGAGCAATGTGAAGCAGATAAGATTGTATTTCGCATTGAAGTGCTTGCAGGCCCGGAGGATGCTGTGAATACTGCCACCACTTTAAGGGCAACATTGGTGATACTTGATAGACAAATGAAGAAATATAAGAAGTATTTCATGGAGGGACTCTCTTGTGGTATCTTATTAATGAAACGTGAAGACTGCATTCAAAACTTGAGAGGACCAATGGAAACAGGGCCATCTGGAAGAGGCAGTGCAATTTCCATTAACAGTACAAGATCCTCATTAACCCAGAAACTCACAGAAAATCGAGTTTTTTGCCCTCAGAATTCCACTAACTCAAGGTCTAGTCTTACCAAGGCGAAGAACACCCAACTTCGATCTCAAGCTAGACAAAGTCCTGCAGATAGAGAGCTAGATATGGCAAGAGGCTTTTGTTTATTACCCTTTACTGATACTCTTGCAATAGGTCATTCAGAAATCTATACAAGGCAGATAGATGAACAAGAGAAGCATACCAATAACCATAAAGAAGTTGAAAATTCTACTTGCTCTCAGTGCAAGAACAGAAGGCCAAAATTTGGAGCGAAAAGAGACTTCACATACGCAGAGCTCCATGCAGCCACACAGGGATTTTCCCTGAAGAACTTTCTTTCAGAAGGCGGGTTTGGTTCTGTCTACAGAGGAGAGCTAAATGGACTGAAGATTGCAGTCAAGCAACACAGATGTGCAAGCCTCCAAGGAGAGAAGGAGTTCAAGTCTGAGGTTCATGTTCTCAGCAAAGCAAGACATGAGAATGTGATCATGCTGCTGGGATCATGCTCTGAGGAAAATAATAGGATTCTTGTTTATGAATACATTTGCAATGGTTCATTAGACCAACATTTATCGCAACATTCTCGTAAACCTCTTAGCTGGACGGACAGGATCAAAGTTGCTTTGGGAGCTGCCAAAGGATTACTGTACTTGCATGAGAACAATATCCTACACAGAGATATGAGACCAAACAATATCCTTGTCACACATGATTTTGACACATTGCTGGGAGATTTTGGTCTTGCAAGACTCAATCTTGAAGACTCAGTATACTCGACAGATGTTGTTGGAACTATGGGATATTTGGCACCAGAATATGCAGAATCTGGTAAAGCATCAACCAAGACTGACGTGTATTCTTTTGGGGTGGTTCTTCTTCAGCTAATAACTGGACTGAGGACCACAGACAAACGACTTGGAGACAAAAGCCTTGTGGGATGGGCTCGACCATTATTGAAAGAGAGGAACTATCCAAATCTACTTGATGAAAGGATGATGGATACACACGATTGCCATCAGCTGTTTTGGATGATTCGTCTAGCAGAAAAATGTCTCTGCAGGGATCCTCGAAAGAGACTAACTATGGATACAGTGGTAAATGCTTTATCTCATATAGTGGAAGGCAGCACATGCAGTGTTGTACTGAGAGATTGTTCCCCTGAATGGTCAGATTCATCCTATGAGATGCCAGACTCTCCCACATTAGAAGGCAGCATGCAGGGCTCTTCTGAATCACAAGATGATGATGAGGATGGAACCTTTTCTGTTGGTATATTTTCATCTGAGATTGGAGCAAGTATAGGTTCAGTGGCCATTGCGAGCACAAGGTCTAGGACATGGTTGGTAGAAGAATTGACAGCTTGGAAAGGACCATTTTGA 1935 0.4289 MIMSEEAERIVMIQDAARDANTMAIKWTLQVLSLGPGDEVTLLAILRHSTMFPFLGPAKLQQRTVMEEIGKRKEEYRNNAEIMKVSEQCEADKIVFRIEVLAGPEDAVNTATTLRATLVILDRQMKKYKKYFMEGLSCGILLMKREDCIQNLRGPMETGPSGRGSAISINSTRSSLTQKLTENRVFCPQNSTNSRSSLTKAKNTQLRSQARQSPADRELDMARGFCLLPFTDTLAIGHSEIYTRQIDEQEKHTNNHKEVENSTCSQCKNRRPKFGAKRDFTYAELHAATQGFSLKNFLSEGGFGSVYRGELNGLKIAVKQHRCASLQGEKEFKSEVHVLSKARHENVIMLLGSCSEENNRILVYEYICNGSLDQHLSQHSRKPLSWTDRIKVALGAAKGLLYLHENNILHRDMRPNNILVTHDFDTLLGDFGLARLNLEDSVYSTDVVGTMGYLAPEYAESGKASTKTDVYSFGVVLLQLITGLRTTDKRLGDKSLVGWARPLLKERNYPNLLDERMMDTHDCHQLFWMIRLAEKCLCRDPRKRLTMDTVVNALSHIVEGSTCSVVLRDCSPEWSDSSYEMPDSPTLEGSMQGSSESQDDDEDGTFSVGIFSSEIGASIGSVAIASTRSRTWLVEELTAWKGPF 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1465 644 MobiDBLite consensus disorder prediction 577 594 - -
Dere07g1465 644 FunFam Proline-rich receptor-like protein kinase PERK8 254 366 - -
Dere07g1465 644 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X1 367 569 - -
Dere07g1465 644 SUPERFAMILY Protein kinase-like (PK-like) 278 583 IPR011009 -
Dere07g1465 644 Pfam Protein tyrosine and serine/threonine kinase 294 554 IPR001245 GO:0004672|GO:0006468
Dere07g1465 644 MobiDBLite consensus disorder prediction 186 212 - -
Dere07g1465 644 MobiDBLite consensus disorder prediction 186 217 - -
Dere07g1465 644 Gene3D Transferase(Phosphotransferase) domain 1 367 567 - -
Dere07g1465 644 ProSiteProfiles Protein kinase domain profile. 292 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g1465 644 ProSitePatterns Tyrosine protein kinases specific active-site signature. 408 420 IPR008266 GO:0004672|GO:0006468
Dere07g1465 644 Gene3D Phosphorylase Kinase; domain 1 261 366 - -
Dere07g1465 644 PANTHER OS01G0253100 PROTEIN 200 559 - -
Dere07g1465 644 MobiDBLite consensus disorder prediction 576 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1465 Dere-ChrDere07 19379647 19392405 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1465 280 577 Trihelix Transcription Factor Family AT5G38560 43.730 1.00e-77 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Dere07g1465 PK_Tyr_Ser-Thr 4.9e-47 CL0016