LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Dere07g1464	ATGGCTGCAGAACCTCAAAGGGTAGTGGTGATCCAGGATGCATCAAGAGAGGTTTGTGCGAAATCAATAAAAATGGCCCTGCAACAGATGGGTCTTCAGCCAGGAGATGAACTTACCATTACAGCGATTCTTGATCGCTTTAATAGTCCCATGGGATACAAGATCAGGGTGGACACCAGTTCATTTGTTGCAACAACCAACAAAGTTGTTGAGGAAGAATTAGTCAGGAAATATGAAGACATTCGTAATAGTGCACAGATCATGAAACTCTCTAAGTACTGTGAACAAAGAAAGATGGTGTTCCACATTGAAGTGGTTGCACGCCCTTTCCTAGAGGTTGCTTCCAATGCTGCCAAAAGTTCAGGTGCAACATGGTTGATTATTGATAGACAGGTGAACAAAGAGAAGAAGCAATTGGACAGGCTACGTTGTGGTATGTATAGAATAAGAAGTGACAATTCAATTCAAAAGTTGAAAGATCCAGATGGGAAAACGGAGAACACCAAATCATCTACTGCAAGTCAAGCTCATTTTAGATATGATGAAATGATACCTGGAAACCTAGATGAAGAACTGTCCCCTAAGAGATCTAAATCATCTCCAAGTGAGCAGTTCACTTCAATTGGAACTTCAAGTATTTTTAGTACTGAAGCCTCAAGTTCAAGCACATATCAGTTAATGAGACACAAAGAGCAAGAAACAGCAGGGATATTTCAGATCTCTTACTGCGACGAGCAGCACGGAAGCGTTAATGAAGTGTCTCAAATGGAGGCAGAATTTACAGAACCTCTTTGTTCAGTGTGCAAGAACAAACGACCCAAAGTCGGACTGAAGAAAGACTTCACTTTTGCAGAGCTCCACACAGCTACACAGGGATTTTCCCAAAAGAACTTTCTATCAGAAGGTGGATTTGGATCTGTCTACAAAGGAGAGCTAAATGGAATAACAATTGCTGTTAAACAACATAAAAATGCTAGCCTCCAAGGAGAGAAGGAATTTAAATCTGAAGTCAATTTACTTAGCAGAGCAAGACATGAGAATGTGGTCATGCTTCTCGGATCCTGCTCAGAAGGGAATCGTAGGCTTCTTGTTTATGAATACGTCTGCAATGGTTCATTAGACCAACATCTATCACAACACTCTCGAACACCACTTAGTTGGGAAGAGAGGATCAAAGTTGCTGTTGGAGCTGCAAACGGCTTGCTATACTTGCATGAGAATAACATTATACACAGAGATATGAGACCAAACAATATCCTTATCACACATGATCATCAACCACTGCTAGGAGACTTTGGTTTGGCAAGAAATCAACATGAGGACTCAATTCAGTCTACAGAGGTTGTTGGAACTTTGGGGTATTTGGCACCTGAATATGCAGAATATGGCAAAGTATCAGCCAAGACAGATGTATATTCTTTTGGGGTGGTTTTGCTACAGCTAATAACTGGAGTGAGGACAACAGACAAAAGACTAGGAGGGAGAAGTCTTGTCGGATGGGCAAGACCACTCTTAAGAGAAAGGAATTATCCTGATCTAATTGATGAAAGAATCATGAACTCTAATGATTTTCTTCAGCTATTTTGGATGGTTCGAATAGCAGAAAAATGTCTAAGCAGGGATCCTCAGAAAAGATTGAATATGGTTGCAGTGGTTAATGCTTTAAGTCGCATAGTGGAAGGCAACACATGTGGTATTATGATACGAGACTTTTCCCCAGCAAGGTCAGATTCATCCTATAGCTCATCAGGCGTGGGAGAATCCAGAGGTGACGACGAGCAAGAATCCATTGAATTAGAAGGAGTGTTAGATAGTATGAGCACAGATTCCACGTGGAGTAGCAGCTTGAACATGATGAGCCAGATGATTGTAAGGCTCCCACCATCGCCTCCAGTTAAAACAACTTCTTCAAGCACATCCATGGTGTGTGATAAATCAAGTGTTGAAAGTAATGAAGACCAGAATAAAAGGAATAGAGACATGTCAGAAAGCAGTAATGAATAA	2004	0.4102	MAAEPQRVVVIQDASREVCAKSIKMALQQMGLQPGDELTITAILDRFNSPMGYKIRVDTSSFVATTNKVVEEELVRKYEDIRNSAQIMKLSKYCEQRKMVFHIEVVARPFLEVASNAAKSSGATWLIIDRQVNKEKKQLDRLRCGMYRIRSDNSIQKLKDPDGKTENTKSSTASQAHFRYDEMIPGNLDEELSPKRSKSSPSEQFTSIGTSSIFSTEASSSSTYQLMRHKEQETAGIFQISYCDEQHGSVNEVSQMEAEFTEPLCSVCKNKRPKVGLKKDFTFAELHTATQGFSQKNFLSEGGFGSVYKGELNGITIAVKQHKNASLQGEKEFKSEVNLLSRARHENVVMLLGSCSEGNRRLLVYEYVCNGSLDQHLSQHSRTPLSWEERIKVAVGAANGLLYLHENNIIHRDMRPNNILITHDHQPLLGDFGLARNQHEDSIQSTEVVGTLGYLAPEYAEYGKVSAKTDVYSFGVVLLQLITGVRTTDKRLGGRSLVGWARPLLRERNYPDLIDERIMNSNDFLQLFWMVRIAEKCLSRDPQKRLNMVAVVNALSRIVEGNTCGIMIRDFSPARSDSSYSSSGVGESRGDDEQESIELEGVLDSMSTDSTWSSSLNMMSQMIVRLPPSPPVKTTSSSTSMVCDKSSVESNEDQNKRNRDMSESSNE	667

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Dere07g1464	667	MobiDBLite	consensus disorder prediction	630	648	-	-
	Dere07g1464	667	MobiDBLite	consensus disorder prediction	649	667	-	-
	Dere07g1464	667	ProSiteProfiles	Protein kinase domain profile.	293	558	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Dere07g1464	667	Gene3D	Phosphorylase Kinase; domain 1	266	367	-	-
	Dere07g1464	667	MobiDBLite	consensus disorder prediction	623	667	-	-
	Dere07g1464	667	PANTHER	OS01G0253100 PROTEIN	177	560	-	-
	Dere07g1464	667	Pfam	Protein tyrosine and serine/threonine kinase	296	554	IPR001245	GO:0004672\|GO:0006468
	Dere07g1464	667	SUPERFAMILY	Protein kinase-like (PK-like)	278	555	IPR011009	-
	Dere07g1464	667	FunFam	Proline-rich receptor-like protein kinase PERK8	255	367	-	-
	Dere07g1464	667	ProSitePatterns	Tyrosine protein kinases specific active-site signature.	409	421	IPR008266	GO:0004672\|GO:0006468
	Dere07g1464	667	MobiDBLite	consensus disorder prediction	574	595	-	-
	Dere07g1464	667	FunFam	receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X1	368	570	-	-
	Dere07g1464	667	MobiDBLite	consensus disorder prediction	155	206	-	-
	Dere07g1464	667	MobiDBLite	consensus disorder prediction	183	197	-	-
	Dere07g1464	667	Gene3D	Transferase(Phosphotransferase) domain 1	368	567	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Dere07g1464	Dere-ChrDere07	19365676	19372571	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Dere07g1464	281	565	Trihelix Transcription Factor Family	AT1G70460	46.026	1.16e-75	255

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_PERK-2	Dere07g1464		PK_Tyr_Ser-Thr	1.8e-47	CL0016