Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1463 ATGGCTGCAGAACCTCAAAGGGTAGTGGTGATCCATAACGCATCAAGTGATGTTTGTGCAGAAGCAATAAAAAAGGCCCTGCAAGCGATGCCTCTTCAGCCAGGAGATGAGCTTGCCATTATGGCGATTCTTGATCAGTTTAATATTCCCAATACATTTTCATTTTTTCGGAGAAAACTGTTGGGATACAAGATCATGGTCGATTCCAGTTCATCTCTTACTACAAATAAGAAGATTCTTGATGAAGAATTAGTTAGGAAAAAGGAATACTATCATAATAGTCCACAAATCAAGAAACTCAGTGAGTACTGTGAAATAAGAAAGATGATATTCCACGTTGACGTGCTTGCATGCCCTTTTCTAGAGGTTGCTTATAATGCTGCTAAAAGTCCAGGAGTTACATGGTTGATCTTTGATAGACAGATGAATGGAGACATGAAACAATTTGACGGGCTGCCTTGTGGTATGTATAGAATAAGAAGTGACAATTCCATTCAAAAGCTGAGAGATCCAACAGTAACAACAATGAACACCAGATTGCATACTGCAAGGCAAGCTCATGTTAGATGTATAAAAATGAAACCTGGAAACCCAGACAAAGAACTTGTCCGTAAGAGACCTACATCATTATCAAGTGAGCAGTTCACTTCAGCTGGAAATTCAAGTTTCTTGAGTATTGAAGCTTCAAGTTCAAGAACGCTCCAGTTTGTGAGACACAAAGAGCAAGAAAAAGTTCGAAATGTAGAACAAGAAACAGAAGGGATATGTTATGTCTCTGACCCCAGTGAGCAACATAAAAGGGATCATGAAGCGTCTCAGATGGAGGCAGCACTTAAAACCCCACTTTGTTCTGTGTGCATGAACAAAAGATCAAATTTTGGTTTGAAGAAAGACTTCACTTTTGCAGAACTCTACACAGCTACACAGGGATTTTCCCAGAAGACCTTTCTATCAGAAGGTGGATTTGGATCAGTCTTTAAAGGAGAGCTAAATGGAACAACAATTGCTGTTAAGCAACATAAAAATGCGAGTCTCAAAGGAGAGAAGGAATTTAAATCTCAAGTCAACTTACTTAGCAGAGCAAGACATGAGAATGTGGTCATGTTGCTGGGGTCTTGCTCAGAAGGAAATCATAGGCTTCTTGTTTATGAATACATCTGCAATGAACACAATCGATTTCCTCTTAGTTGGGAAGAGAGGACCAAAGTTGCTTTTGGAGCTGCAAAAGGCTTGCTATACTTGCATGAGAATAACATTATACATGGAGATATAAGACCAAACAATATCCTTATCACACATGATCATCAACCACTGCTGGGAGACTTTTTTTTGGCAAGAAATCAACAAGAAGACTCAACACTCTCGATTCAGATTGATGGAACTTTTGGGTATTTGCCACCTGAATTTGGAGAATATGGCATATGGTCAACTGAAACAGATGTATATTCTTTTGGGGTGGTTCTGCTACATCTAATAACTGGAATGTCGATAATGGACAGAAGACTAGGAGGGATGAATCTTGTTGGATGGGCAAGAACACTATTGAGAGAAAGGAATTATTCTGATCTAATTGATAAAAGGATCAAAAACTCTCATGATTTTTATCAGCTATTTTGGATGGTTCGAATAGCAGAAAAATGTCTAAGCATGGATCCTCAGAAAAGACTGAATATGGTTGCAGTGGTTAAAGTTTTAAGTCTTATGGTGGAAGGCAACACATGTGGCATCATAGTAAGAGACATTTCCCCTAGAAGGTCTGATTCATCAGATTCATCTTATAGCTCATCAGACTCTGGTGAATCTGAAGGCAACGAGCAGGAATTCATTGAATCAGAAGGGGGATCAATGGAGGTAGACTCAGAAGGTGAGGGGGGTGAGAAGATAGTTGAGACACCGTTAGACGAAGAGGAGAGCATGGGACCGTTGGTGATGTATAATGAGAACTTGTTGCTGGCTGATGTGGTTCGAAAGCTTAATAAACTGCCTGAAGGAAGCTTTGTTTTCAAGGCTGGTAAAATGGAGCTGAAATCTGATGTTAATGCTGAAGACTTTAGTGGCTGGCCACAGAAAGCCATCAAGCAGCCATAA 2088 0.398 MAAEPQRVVVIHNASSDVCAEAIKKALQAMPLQPGDELAIMAILDQFNIPNTFSFFRRKLLGYKIMVDSSSSLTTNKKILDEELVRKKEYYHNSPQIKKLSEYCEIRKMIFHVDVLACPFLEVAYNAAKSPGVTWLIFDRQMNGDMKQFDGLPCGMYRIRSDNSIQKLRDPTVTTMNTRLHTARQAHVRCIKMKPGNPDKELVRKRPTSLSSEQFTSAGNSSFLSIEASSSRTLQFVRHKEQEKVRNVEQETEGICYVSDPSEQHKRDHEASQMEAALKTPLCSVCMNKRSNFGLKKDFTFAELYTATQGFSQKTFLSEGGFGSVFKGELNGTTIAVKQHKNASLKGEKEFKSQVNLLSRARHENVVMLLGSCSEGNHRLLVYEYICNEHNRFPLSWEERTKVAFGAAKGLLYLHENNIIHGDIRPNNILITHDHQPLLGDFFLARNQQEDSTLSIQIDGTFGYLPPEFGEYGIWSTETDVYSFGVVLLHLITGMSIMDRRLGGMNLVGWARTLLRERNYSDLIDKRIKNSHDFYQLFWMVRIAEKCLSMDPQKRLNMVAVVKVLSLMVEGNTCGIIVRDISPRRSDSSDSSYSSSDSGESEGNEQEFIESEGGSMEVDSEGEGGEKIVETPLDEEESMGPLVMYNENLLLADVVRKLNKLPEGSFVFKAGKMELKSDVNAEDFSGWPQKAIKQP 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1463 695 Gene3D Phosphorylase Kinase; domain 1 284 383 - -
Dere07g1463 695 ProSitePatterns Tyrosine protein kinases specific active-site signature. 419 431 IPR008266 GO:0004672|GO:0006468
Dere07g1463 695 FunFam Proline-rich receptor-like protein kinase PERK8 273 385 - -
Dere07g1463 695 MobiDBLite consensus disorder prediction 584 626 - -
Dere07g1463 695 ProSiteProfiles Protein kinase domain profile. 311 568 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g1463 695 PANTHER OS01G0750732 PROTEIN 181 595 - -
Dere07g1463 695 Pfam Protein kinase domain 313 562 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g1463 695 MobiDBLite consensus disorder prediction 587 602 - -
Dere07g1463 695 SUPERFAMILY Protein kinase-like (PK-like) 297 563 IPR011009 -
Dere07g1463 695 MobiDBLite consensus disorder prediction 603 619 - -
Dere07g1463 695 Gene3D Transferase(Phosphotransferase) domain 1 384 581 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1463 Dere-ChrDere07 19346049 19354549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1463 299 565 Trihelix Transcription Factor Family AT1G70460 42.657 1.61e-61 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Dere07g1463 Pkinase 5.8e-34 CL0016