Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1451 ATGACCAAAATGTCGCCGCGGTTGTTGACTTTCTCAGGACCTAATATGTATGGTTTGTTTGGAAATCAGTCTAGCACTATTCCAGGCTATCAAGTTCACGGGGTTGCATTGAGTGTTTCCAGAGAAGATATAGAGGTACGGACTCATAGGAAATGGGGTTGTGGAGCTTGTAATGTCATGCATGCAGAGTCACTACCTATGGCTACATCAGGTATTGATGGTCACCCTGAAGAAAGGGTAGGGAAGCCCACGTATAAGCGACGGAAAGTTTCTGCTATTCGCGATTACCCGCCTGGGGTAGGACGATTTGCAGCAAGAGTTTGTACCATGCCAAAAGTAGATACTGCTAAGGGTTCGGTTTTTGAGGATAAGAGTGGTGGGGCTGAGCTTCAACACTCCGAGTTCATAAGTTCATTCCCTACTGAGACCTCTGAGCAAAATCTTATGGGTCCAAAATTCTTGACACCAGATTTGAATGCAGCCAGTTCCATCTCTAAGAAGGCTGTGACTAGACGGTATCCTTCTCTGAGAAGAGTTTCAGCCATCAGAGACTTCCCTCCTTTATGTGGACCCAAATTTCTGAGTCAGAGTAAGGGTGATTGTCGAAAGGGGATCTCTTCTGTGGAGAACAAGAGGATGGGTCAACGGGACTTAGATGTAGAAGGAAAGCCTTTGAAAAAGGTAGCACCCACTAATGTCAAAGAAGTGGAAAAGAATGTCCAAGGTGGTCATGCCTGCAAGGAAAACCATATGGACATGCAATTGATTGGTGGTGCAAAAGAAAGGAAGACAATGAAAGTTGATTATTTTGTACAGCGTGACAGGTCTAAAGCTGTGATCAGGGCTGAAGACTCTCTAAATAGATCTGCGAAGAAGCTTTTTAAAAAGGAAAACAGAAAGGCTGTTTTCAAAGGTATGGGTAAACTAGTAGTTTTAGAAAAGAAAGATGCTCTTAATACTAATGAAAGTATTAAGTTTTCTGATGTTCACAGATCATGTGGTTTCAATGTAAATGTTCCTCCTCTTGTTCATCCTCATGTGACTGGTCTTGACAGTGACTCTAATGTGATCCGAAATACAGTGAGGGAGACATTGCGCCTATTCCATGCTGTTTATAGAAAGCTATTGCAGGAAGAAGAAGCAAAGTTAAAAGACGGAGCAAATATTCTTAGGAGGATTGATTTACAGGCTGCAAAGATCCTTAAGGACAAAGGAAAATATTTTAATCCAGGCAAGCAGATATTAGGTTCTGTCCCTGGGGTTGAAGTTGGTGATGAATTTCATTATAGGGTGGAGCTTAATATCATTGGCCTTCACCGCCATATACAGGGTGGCATAGATTTTGTGAAGCACAATGGTAAGGTCCTTGCAACTAGTATTGTTGCATCAGGAGGCTACACTGATGAGTTGGATAAATCAGATGTCTTGATTTATTCTGGGCAGGGGGGAAATGTGATGAACACTAAAAAGGAACCCGAAGATCAGAAGCTTGTGCGGGGTAATCTTGCTTTGAAGAACAGTGGGAAGGAAAAGAATCCTGTTAGGGTGATACGTGGTGCTTTGTCTGATGATGGAAAGCATAAGGTATATGTTTATGATGGGTTGTATGTAGTTGAGAGATACTGGCAGGATATGGGGCCGCATGGTAAGCTGATTTTTAAGTTTCAACTGCGAAGAATCCCAGATCAGCCAGAGCTGGCTTGGATTGAAGTGTATAAATCCAAAAAGTTCACAGTAAGGAAGGGTGTGTGTGTTGTTGACATCTCTCGAGGAAAAGAGCCTTTTCCAATTTGTGCTGTGAACACCATAGATAATGAAAAACCACCGTCATTCGAATACACAACTAGGATGATATATCCTGATTGGTGCCATCTGATTCCTGCAGAGGGATGTAAATGTACTAACAGATGCTCTGATCCAGAGATATGTTCTTGTGCACGCAAAAATGGGGGAGTGATTCCATTCAATCACAACAGGTTGATTGTAGAAGCAAAGCCTTTAGTCTATGAGTGTGGTCCTTCTTGCAACTGCCCGTCAACATGCTATAACAGGGTCAGCCAACATGGCATAACACTCCAACTTGAAATTTTTAAAACCGAGACAAGGGGATGGGGTGTGAGATCTCTAAGTTCCATCACTTCGGGAAGTTTTATCTGCGAATATGTAGGAGAGCTACTTGAAGATAAGGAAGCTGAACAAAGAACTGATAATGATGAGTATCTATTTGATATTGGGAATTATTTCGGCAACAATAGTATTTTTGCCAATGGAGTTTCGAGGTGTGAAGTTGGGGAGGATGGTGGTCGCTTCACCATTGATGCAGCCTGGTATGGTAATGTGGGGAGATTTGTCAACCATAGTTGCTCCCCTAATCTGTATGCACAAAACGTTCTGTATGATCACGGTGACCACAGGATGCCTCACATAATGCTGTTTGCTGCTGATAACATTCCTCCCTTAAAAGAGCTGACTTATGATTACAACTATATGAAAGATCAAATCCTTGACTCTGATGGCAATATTAAAAAGAAGGATTGCTATTGTGGTTCTGCGGGGTGCTCTGGTAGGATGTATTGA 2577 0.4234 MTKMSPRLLTFSGPNMYGLFGNQSSTIPGYQVHGVALSVSREDIEVRTHRKWGCGACNVMHAESLPMATSGIDGHPEERVGKPTYKRRKVSAIRDYPPGVGRFAARVCTMPKVDTAKGSVFEDKSGGAELQHSEFISSFPTETSEQNLMGPKFLTPDLNAASSISKKAVTRRYPSLRRVSAIRDFPPLCGPKFLSQSKGDCRKGISSVENKRMGQRDLDVEGKPLKKVAPTNVKEVEKNVQGGHACKENHMDMQLIGGAKERKTMKVDYFVQRDRSKAVIRAEDSLNRSAKKLFKKENRKAVFKGMGKLVVLEKKDALNTNESIKFSDVHRSCGFNVNVPPLVHPHVTGLDSDSNVIRNTVRETLRLFHAVYRKLLQEEEAKLKDGANILRRIDLQAAKILKDKGKYFNPGKQILGSVPGVEVGDEFHYRVELNIIGLHRHIQGGIDFVKHNGKVLATSIVASGGYTDELDKSDVLIYSGQGGNVMNTKKEPEDQKLVRGNLALKNSGKEKNPVRVIRGALSDDGKHKVYVYDGLYVVERYWQDMGPHGKLIFKFQLRRIPDQPELAWIEVYKSKKFTVRKGVCVVDISRGKEPFPICAVNTIDNEKPPSFEYTTRMIYPDWCHLIPAEGCKCTNRCSDPEICSCARKNGGVIPFNHNRLIVEAKPLVYECGPSCNCPSTCYNRVSQHGITLQLEIFKTETRGWGVRSLSSITSGSFICEYVGELLEDKEAEQRTDNDEYLFDIGNYFGNNSIFANGVSRCEVGEDGGRFTIDAAWYGNVGRFVNHSCSPNLYAQNVLYDHGDHRMPHIMLFAADNIPPLKELTYDYNYMKDQILDSDGNIKKKDCYCGSAGCSGRMY 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1451 858 ProSiteProfiles YDG domain profile. 416 559 IPR003105 -
Dere07g1451 858 ProSiteProfiles Pre-SET domain profile. 629 689 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Dere07g1451 858 ProSiteProfiles Post-SET domain profile. 842 858 IPR003616 -
Dere07g1451 858 Gene3D SET domain 580 858 IPR046341 -
Dere07g1451 858 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 250 851 - -
Dere07g1451 858 SUPERFAMILY PUA domain-like 397 573 IPR015947 -
Dere07g1451 858 ProSiteProfiles SET domain profile. 692 828 IPR001214 GO:0005515
Dere07g1451 858 SMART set_7 692 834 IPR001214 GO:0005515
Dere07g1451 858 Gene3D - 398 579 IPR036987 -
Dere07g1451 858 Pfam SAD/SRA domain 415 563 IPR003105 -
Dere07g1451 858 SUPERFAMILY SET domain 576 829 IPR046341 -
Dere07g1451 858 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 101 858 IPR025794 GO:0016571
Dere07g1451 858 Pfam SET domain 703 828 IPR001214 GO:0005515
Dere07g1451 858 SMART G9a_1 411 563 IPR003105 -
Dere07g1451 858 SMART PostSET_3 842 858 IPR003616 -
Dere07g1451 858 Pfam Pre-SET motif 588 684 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Dere07g1451 858 SMART preset_2 585 676 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1451 Dere-ChrDere07 19199379 19202866 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1451 309 855 Su(var)3-9 homologs AT5G04940 38.194 4.51e-114 361
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Dere07g1451 SAD_SRA 2.8e-49 CL0178