Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1450 ATGTCTCTGCATAGAAACTCTGTATCTCTCTTGGTGATTCCCCTCATTGCAGCTTTTGCATATTTCTATGACATGCACTGTAATATTATTAATCTAAACCAGCAGTTTCTGAATAATTCGTGCTTGTCTTCGTCACGTCATCGTCGTCATCCCCACAAGAAACGCCCTGATAATAGCAGCAATGTCAATGCATGCGATGATTTTCCACCAGACATTCCTCCTCCCAACACCAACACGACGTCATATCTCTGCGTGGACCGACGAGGGTGCTGCAACTTCACCACTGTGCAAGGAGCTGTTAATGCAGTTCCAGATTTCAGCGACACAAGAACCATAATATGGATCAACTCTGGCATGCACTACGAGAAAGTGATGGTCCCGAGAACCAAACCCAACATCACGTTTCAAGGACAGGGCTACACTTCAACCGCCATTACATGGAACGACACTGCGAAGTCTGCAAATGGCACATTTTACAGTGGCTCTGTACAAGTCTTCGCCTCCAACTTCATTGCCAAGAACATAAGCTTCATGAACGTGGCACCAATTCCAAGTCCAGGGGTTGAAGGAGCACAAGCAGTAGCAATAAGGGTAGGTGGTGATGAAGCTCAGTTCTGGGGGTGTGGCTTTTTTGGAGCCCAGGATACCCTTCACGATGACAGGGGTCGCCATTACTTCAAAGAATGCTATATTCAGGGCTCCATTGACTTCATTTTTGGCAATGGAAGGTCACTCTATGAGAATTGTCAGCTGGTTTCAATGGCGAATCCGGTGGCACCAGGACAGAGGTTCATAAACGGCGCCGTCACGGCTCACGGAAGAAGTTTGAATGAAGAGAATACAGGGTTTGTTTTTGTGAACTGTAGCATTGGAGGGACAGGAAGAATATGGTTGGGTCGGGCATGGCGACCATATTCCCGCGTTGTTTTTGCCTTCACGACGATGTCTGATATCGTTGCCCCTGAAGGCTGGAATGACTTCAACGACCCTGCAAGAGATCAGACTATATTCTATGGAGAATACAACTGCGCAGGGCCAGGGGCGAACATGAGTATGAGGGCACCCTACGTGCAGAGATTAAATGACACCATTGCTTCTCCTTTTCTCAACGCAACATTTATTGATGGCGACCAATGGTTGCTGCCTTACAAATAA 1155 0.4719 MSLHRNSVSLLVIPLIAAFAYFYDMHCNIINLNQQFLNNSCLSSSRHRRHPHKKRPDNSSNVNACDDFPPDIPPPNTNTTSYLCVDRRGCCNFTTVQGAVNAVPDFSDTRTIIWINSGMHYEKVMVPRTKPNITFQGQGYTSTAITWNDTAKSANGTFYSGSVQVFASNFIAKNISFMNVAPIPSPGVEGAQAVAIRVGGDEAQFWGCGFFGAQDTLHDDRGRHYFKECYIQGSIDFIFGNGRSLYENCQLVSMANPVAPGQRFINGAVTAHGRSLNEENTGFVFVNCSIGGTGRIWLGRAWRPYSRVVFAFTTMSDIVAPEGWNDFNDPARDQTIFYGEYNCAGPGANMSMRAPYVQRLNDTIASPFLNATFIDGDQWLLPYK 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1450 384 ProSitePatterns Pectinesterase signature 2. 231 240 IPR033131 -
Dere07g1450 384 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 71 380 - -
Dere07g1450 384 MobiDBLite consensus disorder prediction 47 70 - -
Dere07g1450 384 FunFam Pectinesterase 77 384 - -
Dere07g1450 384 Gene3D - 76 384 IPR012334 -
Dere07g1450 384 Pfam Pectinesterase 85 377 IPR000070 GO:0030599|GO:0042545
Dere07g1450 384 SUPERFAMILY Pectin lyase-like 82 382 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1450 Dere-ChrDere07 19195797 19198050 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1450 54 380 Carbohydrate Esterase AT1G05310 71.865 0.0 521