Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1447 ATGGAAATGCCTTCTCGTGGTGCTGCTTCTTCTGCATACAGAGGCGTCCGCAAGAGGAAATGGGGAAAATGGGTTTCAGAAATAAGAGAGCCCGGCAAGAAGACCAGAATCTGGCTAGGCAGCTTTAAGACGCCGGAGATGGCAGCGGCGGCATACGACGTCGCTGCGTTGCATTTTCGCGGTCGCGACGCCCGGCTCAACTTCCCAGAGCTGGCCGGCAGCCTCCCCCGCCCGGCCAGCAACGACGCCGACGACATTCGCATGGCAGCACATGAGGCCGCCCTGAGGCTGAGGACCACTCCGGTGGCAGCGGCGCCTGAGTCTTCGGGCTCTGCAGGGATGCCGGCGACGGTGAGGCTGTCGCCGACGCAGATTCAGGCCATCAATGAGTCGCCGTTGGACTCGCCGAGGATGTGGATGCAAATGGCGGAGGCAATGATGGTGAACGATCATCCATCGGAGACGTTTGTGTATGATTATGAGGACAATGCGTCGGAGGATATGCAAAGTGATTCTCTCTGGGATCCTTAA 531 0.5895 MEMPSRGAASSAYRGVRKRKWGKWVSEIREPGKKTRIWLGSFKTPEMAAAAYDVAALHFRGRDARLNFPELAGSLPRPASNDADDIRMAAHEAALRLRTTPVAAAPESSGSAGMPATVRLSPTQIQAINESPLDSPRMWMQMAEAMMVNDHPSETFVYDYEDNASEDMQSDSLWDP 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1447 176 CDD AP2 11 71 IPR001471 GO:0003700|GO:0006355
Dere07g1447 176 Gene3D AP2/ERF domain 12 70 IPR036955 GO:0003700|GO:0006355
Dere07g1447 176 PRINTS Ethylene responsive element binding protein signature 51 71 IPR001471 GO:0003700|GO:0006355
Dere07g1447 176 PRINTS Ethylene responsive element binding protein signature 13 24 IPR001471 GO:0003700|GO:0006355
Dere07g1447 176 FunFam Ethylene-responsive transcription factor 2 11 70 - -
Dere07g1447 176 Pfam AP2 domain 12 61 IPR001471 GO:0003700|GO:0006355
Dere07g1447 176 SUPERFAMILY DNA-binding domain 11 70 IPR016177 GO:0003677
Dere07g1447 176 ProSiteProfiles AP2/ERF domain profile. 12 69 IPR001471 GO:0003700|GO:0006355
Dere07g1447 176 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 9 146 - -
Dere07g1447 176 SMART rav1_2 12 75 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1447 Dere-ChrDere07 19124574 19125104 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1447 11 176 AP2-EREBP Transcription Factor Family AT1G71450 63.314 2.99e-65 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dere07g1447 AP2 6.1e-13 CL0081