Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1440 ATGGCCCACCACAACCTTCCACCCTTCCCAACAGTCACCTTGCCTCTTTGTTGTACAGCAGCCTACCTCTTTATTGCCTTTTACCTCTTCAAAATCGTCAAAATCCTCAAACTTTATAAGTACCCACTGCTTCTTCTTCTCCCTCACAATGCGCTTCTGCTCACACACACACAATCTGCGATCTCAGACTCAGTTAAGCCATCCATTGTTCGTCAAATGAGTTGCAGCTCCGGCGAGAACAATGGAAGCAGCACAATGATAAGTGAGAAGAACTCTGTCAAGTACAAGGGAGTGCGCCGCCGGAAGTGGGGCAAGTGGGTGTCGGAGATCCGAGTCCCCGGCACACAGGAGCGGCTGTGGCTGGGCACCTACGCCACGCCGGAGGCCGCGGCGGTGGCTCACGACGTCGCCTTCTACTGCCTGAGGAGACCAGCTTCGTTGGAGAAGCTCAACTTGCCGGAGATGTTGCCTTCTTGCCATGTCCACGGGCCGAGAGAGATGTCACCGAGGTCCGTGCAGATGGCGGCGTCGGACGCCGGTATGGCTGCTGACGCGCAGAGCATTGTTGCAGCAGAAGGGAAGAAGAAGGCTGATGAGCATAGCAGAAACAGTGAGAAGGAAGGGTTTTGGTGGGATGATGATGGTGATGCTGGTGCGATGTTGCAAGGCATGACTGAAGGGTATACACACGGAGAAGATTCGAGCATTTCCATTGAAGATTATTTTGTGGATATTCAACATTTAGATCAGCTTCAACCTTCTGGCCAAAAAGGCAAAAAATAG 783 0.5236 MAHHNLPPFPTVTLPLCCTAAYLFIAFYLFKIVKILKLYKYPLLLLLPHNALLLTHTQSAISDSVKPSIVRQMSCSSGENNGSSTMISEKNSVKYKGVRRRKWGKWVSEIRVPGTQERLWLGTYATPEAAAVAHDVAFYCLRRPASLEKLNLPEMLPSCHVHGPREMSPRSVQMAASDAGMAADAQSIVAAEGKKKADEHSRNSEKEGFWWDDDGDAGAMLQGMTEGYTHGEDSSISIEDYFVDIQHLDQLQPSGQKGKK 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1440 260 ProSiteProfiles AP2/ERF domain profile. 94 153 IPR001471 GO:0003700|GO:0006355
Dere07g1440 260 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 80 204 - -
Dere07g1440 260 SMART rav1_2 94 159 IPR001471 GO:0003700|GO:0006355
Dere07g1440 260 MobiDBLite consensus disorder prediction 190 211 - -
Dere07g1440 260 MobiDBLite consensus disorder prediction 191 211 - -
Dere07g1440 260 SUPERFAMILY DNA-binding domain 94 145 IPR016177 GO:0003677
Dere07g1440 260 Pfam AP2 domain 94 143 IPR001471 GO:0003700|GO:0006355
Dere07g1440 260 CDD AP2 94 154 IPR001471 GO:0003700|GO:0006355
Dere07g1440 260 Gene3D AP2/ERF domain 93 154 IPR036955 GO:0003700|GO:0006355
Dere07g1440 260 PRINTS Ethylene responsive element binding protein signature 117 133 IPR001471 GO:0003700|GO:0006355
Dere07g1440 260 PRINTS Ethylene responsive element binding protein signature 95 106 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1440 Dere-ChrDere07 19046206 19046988 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1440 89 207 AP2-EREBP Transcription Factor Family AT1G71520 56.911 1.33e-40 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dere07g1440 AP2 4.3e-11 CL0081