Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1431 ATGCAAGGGCAAAGAAGTTGCGAAGTAGTCTGCCCTACTCCGAGGCTGCTAAATCACGCACTGAATTGGCGAATTCATTTACTCTCTCTCTCTGACTGTGGCTCTTTGAGAACGAAGAAAGCAATGGGAAGCCGCACAGTGGATCAGAAATCCCCGAAGCTTCCTCTTCCTGGCAAGCGCAACATCCTCATCACCAGTGCCTTGCCTTACGTCAACAACGTTCCTCATCTCGGCAATATCATCGGATGCGTGTTGAGTGCGGATGTCTTTGCTCGATATTGCCGGCTTCGGGGTTACAATGCTATATACATCTGTGGGACTGATGAGTATGGAACAGCAACAGAGACTAAAGCCATGGAAGAGAAATGCTCCCCTAAAGAGATTTGTGACAAATATCATGCTATTCATAGGGAGGTCTACAATTGGTTCAATATAAGTTTTGATGAATTTGGAAGGACCTCATCCCCACAGCAAACTGAAGTCTGTCAAGCAATCTTTAAGAAACTATTGGAGAACAACTGGCTTTCTGAGAGTACAATGCAGCAGCTTTACTGCGATAGATGCCAAAGGTTCTTAGCTGACCGGCTTGTGGAGGGTACTTGCCCAACCCCAGGGTGTGAGTATGATTCTGCACGAGGAGATCAATGTGAGAAGTGTGGGAAGCTTTTGAACCCTACAGAGTTGAAGAGTCCCAGGTGCAAGGTTTGTCAAAAAGTTCCACACATTCGTGATACAAACCATTTGTTTCTTGAACTCCCTCTATTGAAGGATAAATTGGAAAAATATATCAATGAGATGTCAGTGGTGGGATCATGGAGTCAAAATGCTGTCCAGACGACAAATTCGTGGCTTAGAGAAGGATTAAAGCCACGATGTATTACCAGAGATCTGAAGTGGGGAGTTCCTGTTCCACACGAGAAATACAGTGACAAGGTTTTCTATGTCTGGTTTGATGCACCTATTGGATATGTCTCAATCACTTCATGTTATACATCTGATTGGGAGAAATGGTGGAAGAACCCAGAGAATGTGGAGTTGTATCAGTTTATGGGCAAAGACAATGTGCCATTCCACACTGTGATGTTTCCCTCTACGCAACTTGGAACTGGTGAAAATTGGACTTTAATGAAGACTATTAGTGTTACTGAATACTTGAATTATGAAGCAGGGAAGTTTTCCAAAAGCAAAGGCATTGGAGTATTTGGTAATGATGCAAAAGATACTAATATTCCAGTTGAAGTATGGAGATATTACTTGCTAACCAATAGGCCTGAGGTATCCGATACGTTATTTACATGGCCTGACTTGCAAGCAAAGCTAAACAGTGAGTTGTTGAACAATCTGGGCAACTTCATCAACCGAGTTTTGACTTTTGTTGCTAAACCTTCAGGTGGAGGATATGATTCCATTATTCCCAGCATTCCCGCTGATGTAGTAGCTGATTCCCATGAACCAACAAAAAAATTGGCTGATACAATTGCTGCATATGTGGAGCAATATATAGAAGCCATGGAGAAGGTTAAACTAAAGCAAGGATTAAAAATTGCGATGAGCATATCCAATGAGGGTAACGGGTATCTGCAGGAAACTAAATTCTGGAATCTTTACAAGGACAACCGACCTCTGTGCTCCCTAGTTATAAAGACTGCAGTTGGGGTTGTATATCTTCTTGCATGTTTGTTGGAACCTTTTATGCCATCTTTTTCTCTTGAGGTATTTAAGCAGCTAAATTTGCCTCCTGTGGTGCATGATTCACTTTGTGACGAAAAAGGAGATGTTGATAGGGTAAGAAGACCTTGGGAGATCATAAGTGCTGGTCATAAAATTGGGACACCTCAGCCTTTGTTCAAGGAGCTGAAAGATGAAGAAGTGGAGTTCTACAGGAAGAAGTTTGCTGGAAGTCAGGCAGATAGGGTTGAACGGGCAGAGGTTGAGGCTGGAAAGGTTGCTGAACAACTGAAGAAAACAAAAATTTCAGATGGTAATGGAAAGAAAAAACAATCAACAAAATCTTCAAATGAAGGCAAAAACAAGGCTGCTGCTGAACTAGAAATTTCCATAACAAGGCTTGACATTCGTGTTGGCCTCATAAAAAATGCTAAAAAACATCCCGATGCAGATTCACTTTATGTAGAAGAGATTGATGTGGGTGAAGAACAAACCAGAACTGTTGTCAGTGGGCTTGTCAAGTATATACCACTTGATGAAATGCAGAATCGGAAGGTGTGTGTCCTTTGCAACCTAAAGCCAGCAACCATGCGGGGCATTAAATCCCAAGCAATGGTTCTTGCTGCTTCTGATGAAACCAAGGTTGAATTGGTTGAGCCACCCAGTTCTGCTAACGTAGGAGAGCGAGTTACATTTCCGGGATACGAAGGTGTTCCTGATGAACTCTTGAACCCAAAGAAGAAGGTCTGGGAAACGTTGCAAGTGGATCTGCATACCAATGAGGAATTAGTTGCATGCTATAAAGATGTTCCATTAACCACATCAGCAGGCATTTGCAAGGTTTCATCCATACGCGGTGGGCCAATCCGATAG 2541 0.427 MQGQRSCEVVCPTPRLLNHALNWRIHLLSLSDCGSLRTKKAMGSRTVDQKSPKLPLPGKRNILITSALPYVNNVPHLGNIIGCVLSADVFARYCRLRGYNAIYICGTDEYGTATETKAMEEKCSPKEICDKYHAIHREVYNWFNISFDEFGRTSSPQQTEVCQAIFKKLLENNWLSESTMQQLYCDRCQRFLADRLVEGTCPTPGCEYDSARGDQCEKCGKLLNPTELKSPRCKVCQKVPHIRDTNHLFLELPLLKDKLEKYINEMSVVGSWSQNAVQTTNSWLREGLKPRCITRDLKWGVPVPHEKYSDKVFYVWFDAPIGYVSITSCYTSDWEKWWKNPENVELYQFMGKDNVPFHTVMFPSTQLGTGENWTLMKTISVTEYLNYEAGKFSKSKGIGVFGNDAKDTNIPVEVWRYYLLTNRPEVSDTLFTWPDLQAKLNSELLNNLGNFINRVLTFVAKPSGGGYDSIIPSIPADVVADSHEPTKKLADTIAAYVEQYIEAMEKVKLKQGLKIAMSISNEGNGYLQETKFWNLYKDNRPLCSLVIKTAVGVVYLLACLLEPFMPSFSLEVFKQLNLPPVVHDSLCDEKGDVDRVRRPWEIISAGHKIGTPQPLFKELKDEEVEFYRKKFAGSQADRVERAEVEAGKVAEQLKKTKISDGNGKKKQSTKSSNEGKNKAAAELEISITRLDIRVGLIKNAKKHPDADSLYVEEIDVGEEQTRTVVSGLVKYIPLDEMQNRKVCVLCNLKPATMRGIKSQAMVLAASDETKVELVEPPSSANVGERVTFPGYEGVPDELLNPKKKVWETLQVDLHTNEELVACYKDVPLTTSAGICKVSSIRGGPIR 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1431 846 ProSitePatterns Aminoacyl-transfer RNA synthetases class-I signature. 69 80 IPR001412 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Dere07g1431 846 FunFam Methionine--tRNA ligase 197 233 - -
Dere07g1431 846 Gene3D HUPs 61 444 IPR014729 -
Dere07g1431 846 Pfam Anticodon binding domain of methionyl tRNA ligase 484 635 IPR041872 -
Dere07g1431 846 SUPERFAMILY Methionyl-tRNA synthetase (MetRS), Zn-domain 197 233 IPR029038 -
Dere07g1431 846 Hamap Methionine--tRNA ligase [metG]. 60 630 IPR023458 GO:0004825
Dere07g1431 846 MobiDBLite consensus disorder prediction 655 672 - -
Dere07g1431 846 Pfam Putative tRNA binding domain 692 784 IPR002547 GO:0000049
Dere07g1431 846 CDD tRNA_bind_EMAP-II_like 685 787 - -
Dere07g1431 846 FunFam tyrosine--tRNA ligase, cytoplasmic isoform X2 685 846 - -
Dere07g1431 846 SUPERFAMILY Nucleotidylyl transferase 59 443 - -
Dere07g1431 846 Gene3D - 445 618 - -
Dere07g1431 846 Gene3D - 685 846 IPR012340 -
Dere07g1431 846 SUPERFAMILY Nucleic acid-binding proteins 688 830 IPR012340 -
Dere07g1431 846 MobiDBLite consensus disorder prediction 655 678 - -
Dere07g1431 846 CDD MetRS_core 61 431 IPR033911 GO:0004825|GO:0006431
Dere07g1431 846 Gene3D - 197 233 IPR029038 -
Dere07g1431 846 FunFam Methionine--tRNA ligase cytoplasmic 445 618 - -
Dere07g1431 846 CDD Anticodon_Ia_Met 440 576 IPR041872 -
Dere07g1431 846 ProSiteProfiles tRNA-binding domain profile. 686 787 IPR002547 GO:0000049
Dere07g1431 846 Pfam tRNA synthetases class I (M) 62 456 IPR015413 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Dere07g1431 846 PRINTS Methionyl-tRNA synthetase signature 64 77 IPR033911 GO:0004825|GO:0006431
Dere07g1431 846 PRINTS Methionyl-tRNA synthetase signature 313 324 IPR033911 GO:0004825|GO:0006431
Dere07g1431 846 PRINTS Methionyl-tRNA synthetase signature 97 111 IPR033911 GO:0004825|GO:0006431
Dere07g1431 846 PRINTS Methionyl-tRNA synthetase signature 443 454 IPR033911 GO:0004825|GO:0006431
Dere07g1431 846 PRINTS Methionyl-tRNA synthetase signature 145 156 IPR033911 GO:0004825|GO:0006431
Dere07g1431 846 PRINTS Methionyl-tRNA synthetase signature 348 363 IPR033911 GO:0004825|GO:0006431
Dere07g1431 846 PANTHER METHIONINE--TRNA LIGASE 40 840 IPR023458 GO:0004825
Dere07g1431 846 SUPERFAMILY Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases 448 632 IPR009080 GO:0000166|GO:0004812|GO:0005524|GO:0006418
Dere07g1431 846 NCBIfam methionine--tRNA ligase 62 579 IPR014758 GO:0000166|GO:0004825|GO:0005524|GO:0006431
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1431 Dere-ChrDere07 18849878 18860148 Dispersed