Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1426 ATGACCCTCCCCAGCAGCCCCACTGACGAGCTGAAGACCCTCCTTTCCCTATCTCCATCTCTCTTCCAGTCAAATTGTCAGTCATTGCTGTTTGTGTTTAGCTGGCCCATGGATCCATTTGATGACATTTTCCCAGAAGCTCCTGTTGCACGTGCTCGGGTGGGTGGCAAATTTATTCCAAAGGCCAAATCTAAACAGCTACCCCGAAAGGAAATATCTAGATCCGAACATGCGACTTCAGGTAATGATGGAAAGAATGAGCATGTTGCTTCATCATCCACCAGCTCGGACACAGTAGGAAATATTCCAAATGAATATAGAAACCCAGTTGATTTAATTCCAAATACATCAGCTAAAGAATTTCTGAAATCTGATCATAGTTCACCAGTAGAAATCCCTATTTTGGATAATACTACTAATCCTGGCCTGTGGAATGTTGAGCAAAGTAATGCTAATGAAGACAATGCAGTCTTGGTGGATGCTATGCATTCAACCATTGCAGCATCTGAGGTCAATTGTGGTTGGAATTCTACTGATTTTTCAGGAGAAGCTAATGAGGCAGAGCCTGTAGGTTTTGACCTGGGCTTAGAAACAGACATTATTCCTGCAACCAACCTCCATAATGCTGAAGCAAATCTATTGAGAAATGTCATTGATCAATCTTCAGCTAGGTCTACCATTATTAAGACTGATCAACCTTCTAAATACTGGGAAGGTGAAGGTCCATTTCTTGAAGGCAACAAAAGTTTGGAATCTATTGATACCTCATTGCAAGTTGGTCCTGACCTGGAATCCCGAAGTGCTTCAGATTACAAGCTGGCAAATTTGGAGAACATTCATTCAAATGAATTTGAAAGAGCAGGAGAGGTAGAGTCTGCAGAATTTGAATTGCCTTTCAGAGACACTCTTCCTGATCTTTGTATCCGGAATGCCCGTAAGTTTCAACCTAAGATTAAGCCTCGGCCTAGAGTAGGCGCTGCAGCGGATGTTCCTTCTGCTTCATCTAATGAGATCCTTAGGACAACTGATACATCTAATGATATCGGTTATGCATGCCCAAGTATGCCATTCTCTGAAGACCAAAGAAGCCTGGGGGCTGGAATTCCTTCACAATCAGATTCTTCAAATGCCATGCATCCAGAGGTTGCAGTTCATAACGGACCAAGAGATTGGCCTTCTAGCTGTGGAAAGTCAGCTGGAGAGACTGCAGACATATTTTCTGTGTTGGAAAACCTTGATGATATTCTCCCACAAGCTGCAACTAGTACAGGAAAATTAGCTCATCATTCTTTCCATGCGAAGAGCACAGAGGCTTTTGTTATTCCTGCTTGCAGCACTGTTAACTCTTCAATTTTTGGAGCATGTGATTCTGCCCAAGTTCAAAAATGTCCTGACTATAATACTACTCAAAATTCGTTAACCTTCAAGGAAGCTGCATTCTTCAATGAGGGTGATTCTCACACTAACAATGGAAGGTTGGGAACAGAGGAAGTAGTGGGATTGAATCCTGCCTGCCCTCTTGATGACACTCTTCATTATTCATCCATGAAATCTGCACCAGATCCAACTTTTGAAATTTCAGTGCATGAAGAAGTGACAAATGCTGCTGATAGTTCTACTTTTGATGATTTTATGCCTGTAGAAGATGTTCCTGGAGGAAAAACTATTTTTTGGTTTATTAATTGTGTTTCCCAGGATGGTACTGAGAAAGGAAATGATGCCACAATGTCAAGTTCTCTAAAAAACCTTAAAAAGTCTTCTGTAGCAGGTGTGAAGGATAAAGTTGGTAAACCTTTGAGGCAGCCAAGAAAGCGAGCAACTCGTATACCTGTTGATCCAGCAGAGAATGAGGATGCTGAGGAGGAGGATGAGCTTGACCCTACATACAACTCTAACATAGATGAACTTGAAGAACATGATGATGAATATCAATTGGATAATGCATCTAGGAAGAAAAGAGCACCAGGTTCAAAGAAGAAATCTATAGCTAAAAATGGAAAAGTGCCTCACAACCATAAGAGGGGCAAGGAGGACGTAGACAGACCTACTGAAGAACCTCCTAAAAAGTTCTCACATTCAACCCGACGAAGAAAAAGATGTGTGGACAAGGCTTTGCTGGAAATTCCTGAGGATGAACTGGATCCTCAAACATTGCGAATCAGGGATATTATTTTACTTGCAGACTATAGGGAGCGACTAGCGAAAAAGGAGGCAGCAACAATAAAAGCATCTTCCATTAATGAAAGAGATGGAGGTTCCTTTCATGAGGCTGCTGCTCATAATGAAGACATCTTAGGTTCAGAAGATGGAAGGGGCTCGGATGATGATCAAGCTAGTGAAAGCGTTCCATTGGCTTCATCTTTATTTAATTACCAGTCTTTCATGGATAAGACTCCTAGTGGAAAATGGTCGAAACAAGACACTGAACTGTTCTATGAGGCTGTTCGGCAGTTTGGCACAGATTTTTCTATGATACAACAGCTTTTCCCTGGTCGAACACGTCATCAAATTAAGTTGAAGTACAAGAAGGAAGAACGTCAACATCCTTTACAGCTATATGATGCCGTAAACAATCGTGTGAAAGATTTTTCTCATTTTAAATCGGTTATTGAGCGGCTACAACAAGCTTCTGCGAAGACAGAACATGACCCTATTGATGTCTCAGTTGGCATGAGAGAGGAAGAGGTGGAGGTCGTGACAGTCGATACTAACGAGGAGAAGGTTGCAAAATCTGAGCAGGACGCAGCTTTGCAAGATCAGGAAGACAATGGGTCATTTCATAGTGCTGAGAAATCTGATGAAAGTGATGAGGATGACTTTCAAAGATGGTGTCAATATAAAAGCGACTATTAA 2853 0.4171 MTLPSSPTDELKTLLSLSPSLFQSNCQSLLFVFSWPMDPFDDIFPEAPVARARVGGKFIPKAKSKQLPRKEISRSEHATSGNDGKNEHVASSSTSSDTVGNIPNEYRNPVDLIPNTSAKEFLKSDHSSPVEIPILDNTTNPGLWNVEQSNANEDNAVLVDAMHSTIAASEVNCGWNSTDFSGEANEAEPVGFDLGLETDIIPATNLHNAEANLLRNVIDQSSARSTIIKTDQPSKYWEGEGPFLEGNKSLESIDTSLQVGPDLESRSASDYKLANLENIHSNEFERAGEVESAEFELPFRDTLPDLCIRNARKFQPKIKPRPRVGAAADVPSASSNEILRTTDTSNDIGYACPSMPFSEDQRSLGAGIPSQSDSSNAMHPEVAVHNGPRDWPSSCGKSAGETADIFSVLENLDDILPQAATSTGKLAHHSFHAKSTEAFVIPACSTVNSSIFGACDSAQVQKCPDYNTTQNSLTFKEAAFFNEGDSHTNNGRLGTEEVVGLNPACPLDDTLHYSSMKSAPDPTFEISVHEEVTNAADSSTFDDFMPVEDVPGGKTIFWFINCVSQDGTEKGNDATMSSSLKNLKKSSVAGVKDKVGKPLRQPRKRATRIPVDPAENEDAEEEDELDPTYNSNIDELEEHDDEYQLDNASRKKRAPGSKKKSIAKNGKVPHNHKRGKEDVDRPTEEPPKKFSHSTRRRKRCVDKALLEIPEDELDPQTLRIRDIILLADYRERLAKKEAATIKASSINERDGGSFHEAAAHNEDILGSEDGRGSDDDQASESVPLASSLFNYQSFMDKTPSGKWSKQDTELFYEAVRQFGTDFSMIQQLFPGRTRHQIKLKYKKEERQHPLQLYDAVNNRVKDFSHFKSVIERLQQASAKTEHDPIDVSVGMREEEVEVVTVDTNEEKVAKSEQDAALQDQEDNGSFHSAEKSDESDEDDFQRWCQYKSDY 950
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1426 950 CDD SANT 802 843 IPR001005 -
Dere07g1426 950 MobiDBLite consensus disorder prediction 63 110 - -
Dere07g1426 950 MobiDBLite consensus disorder prediction 671 691 - -
Dere07g1426 950 ProSiteProfiles SANT domain profile. 798 846 IPR017884 -
Dere07g1426 950 PANTHER RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B 53 950 - -
Dere07g1426 950 MobiDBLite consensus disorder prediction 653 670 - -
Dere07g1426 950 FunFam Predicted protein 803 878 - -
Dere07g1426 950 SMART sant 799 847 IPR001005 -
Dere07g1426 950 MobiDBLite consensus disorder prediction 585 696 - -
Dere07g1426 950 SUPERFAMILY Homeodomain-like 801 849 IPR009057 -
Dere07g1426 950 MobiDBLite consensus disorder prediction 924 940 - -
Dere07g1426 950 Gene3D - 803 864 - -
Dere07g1426 950 MobiDBLite consensus disorder prediction 615 642 - -
Dere07g1426 950 Pfam Myb DNA-binding like 793 877 IPR039467 -
Dere07g1426 950 MobiDBLite consensus disorder prediction 899 917 - -
Dere07g1426 950 MobiDBLite consensus disorder prediction 899 940 - -
Dere07g1426 950 MobiDBLite consensus disorder prediction 64 83 - -
Dere07g1426 950 MobiDBLite consensus disorder prediction 84 103 - -
Dere07g1426 950 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 795 851 IPR017930 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Dere07g1426 Myb_DNA-bind_7 6.1e-29 CL0123