Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1425 ATGGCCTACATGTGCGCAGACAGTGGCAATCTAATGGCTATCGCTCAGCAAGTCATCAAGCAGAAGGAGCAGCAAGAGCAGCAGCAGCAGCAGCATCAGCATCAGAGCCATAGCCACAACCAGCATCATCATCAGCAGCAACTCTTGGGGATTCACCCCATCTCGCTCAATCCGTGGACCAACACTCCGCCTCTGGGATACGGCCTCGCCGGAGCTGACTTCTCCGACCCGTTTCAAGTCGGGTCGGGCCCCGACGCCGCTGAGCCTGGCTTCCAGTTCCCTCATCTGGACCACCACCACTCCACTGGGTTCAGGTTCTCTGATTTCGCTGCCGATGCTGGCGGTGGCGCGTGCGGTGGGGCAGGTGAGTTCGACTCGGACGAGTGGATGGATAGCTTGATGGGCGGTGCTGGTGGTACTGGTGATTCAACGGATAGTTCCAATCTGCCATCTGCGTGCGACGCGTGGCAGAACAATGCCGATTTTGGCCTTTACGCCTCCAACCCCTTCGCTACCTGCCCCACCCGACTCTCGCCACCATCGGATCTTAATCGGGTCATTTTCTCGTCGGAACCTACTACGTGGACCTCCGCACCGCCGCCATCTCCACCTACCTTGGTGAAAGAAGCTGCTAAACCGTCACCAACTTCGCCACCACCGGCGGAGGCTGCCGTGCTCCGAAACGACGGTGGCCTTGGCGTTTCTTCGAGCGTAGCAGAAAGTAGTGAGTCTACGCATCCGCTTCTGAAAGCACTAATCGACTGTGCTGGACTGGTTGAGAGCGAACCAGATCAGGCTGAAGAGTCTCTAATACAGCTGAGCAAGACGGCATCGCAGCATGGAGATCCTACTCAAAGAGCTGCGTTCTACTTCTGCGAAGCTCTACGTAGCAAAATATCACCAGAAACAATGGAGACTACTTGTACTACTTCAGAGGAGGAATTAACACTCTCATACAAAGCTCTGAATGATGCGTGCCCTTACTCGAAGTTCGCTCATCTAACTGCGAACCAAGCTATACTGGAAGCTACTGAAGGAGCCACCAAGATTCACATAGTGGATTTTGGGATTGTTCAAGGCGTTCAATGGGCGGCTCTGTTACAGGCATTCGCCACTCGATCCTCAGGGAAGCCTGCTAGCATTCGCATTTCTGGAATTCCTGCTATGGTTCTAGGAACAGCTCCTCGCTCATCTTTGCTAGCCACAGGCAATCGTCTTTCTGAGTTCGCCAAGCTTCTAGACTTGAACTTCGAGTTCGAACCCATTCTGACCCCAATTCATGAGCTGAACCAGTCCAGCTTCGCCACTGATCCTGACGAGGCCTTGGCGGTGAACTTCATGCTTCAATTGTACAATCTGTTGGATGAGACACCCGTTGCGGTGGAGACTGCACTCCGATTGGCTAAATCTTTGAAACCTAGAATTGTTACTCTTGGAGAGTATGAAGCTAGCTTGACCAGGGTTGGTTTCCTGAACCGGTTCAAGACTGCGTTGAGGTACTTCACCGCAATTTTTGAGTCTTTGGAGCCGAATTTGGCACGCGACTCCCCAGAGAGGCTCCGAGTGGAGAGACTTCTGCTCGGCCGGAGAATTGCTGGCGTGGTTGGATCAAGGTCGCGGGGGACTATTAGAGAGCATATGGAAGACAAAGAGCAGTGGAGGGTTTTGATGGAAAGTTCTGGCTTTGAATCTGTAAACCTCAGTCATTATGCAATTAGCCAAGCTAAGATTCTTCTGTGGAATTACAACAGTACTCTGTATTCATTGGTGGAATCTGAACCTGGGTTTTTGACCCTGGCTTGGAATGAGGTCCATCTCCTGACTGTTTCTTCGTGGCGTTAG 1842 0.5255 MAYMCADSGNLMAIAQQVIKQKEQQEQQQQQHQHQSHSHNQHHHQQQLLGIHPISLNPWTNTPPLGYGLAGADFSDPFQVGSGPDAAEPGFQFPHLDHHHSTGFRFSDFAADAGGGACGGAGEFDSDEWMDSLMGGAGGTGDSTDSSNLPSACDAWQNNADFGLYASNPFATCPTRLSPPSDLNRVIFSSEPTTWTSAPPPSPPTLVKEAAKPSPTSPPPAEAAVLRNDGGLGVSSSVAESSESTHPLLKALIDCAGLVESEPDQAEESLIQLSKTASQHGDPTQRAAFYFCEALRSKISPETMETTCTTSEEELTLSYKALNDACPYSKFAHLTANQAILEATEGATKIHIVDFGIVQGVQWAALLQAFATRSSGKPASIRISGIPAMVLGTAPRSSLLATGNRLSEFAKLLDLNFEFEPILTPIHELNQSSFATDPDEALAVNFMLQLYNLLDETPVAVETALRLAKSLKPRIVTLGEYEASLTRVGFLNRFKTALRYFTAIFESLEPNLARDSPERLRVERLLLGRRIAGVVGSRSRGTIREHMEDKEQWRVLMESSGFESVNLSHYAISQAKILLWNYNSTLYSLVESEPGFLTLAWNEVHLLTVSSWR 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1425 613 MobiDBLite consensus disorder prediction 19 35 - -
Dere07g1425 613 Coils Coil 15 35 - -
Dere07g1425 613 ProSiteProfiles GRAS family profile. 239 613 IPR005202 -
Dere07g1425 613 Pfam GRAS domain family 249 613 IPR005202 -
Dere07g1425 613 MobiDBLite consensus disorder prediction 191 227 - -
Dere07g1425 613 MobiDBLite consensus disorder prediction 19 47 - -
Dere07g1425 613 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 224 607 IPR005202 -
Dere07g1425 613 MobiDBLite consensus disorder prediction 196 220 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1425 Dere-ChrDere07 18685214 18687055 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1425 1 613 GRAS Transcription Factor Family AT5G66770 59.839 0.0 659
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dere07g1425 GRAS 1.2e-107 CL0063