Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1410 ATGAAGCTCTCCTTCTCCATGCCATCAAAATCCACGTCCAAGTCAAACTCTATCAAGCCCTCGCAGAAATTTGACGGTGCTGCCAATAATAAGGATGGAAACACCAAAGGCAGAGAGTACGTTACAGAGTTCGATGCATCCAAATCCCCAACTGATCCTAACAAATCCAGCGGCATAGTTATTCCCCCTATGAAAAATGAATGGAATGAAGGGAGGTCCCGCAAGAGAATGAAGAATCTAGAGTTGCCCATCACAGAATCTAATGGAACCGAGTTGGGATTTGAGTTGGATACGTCAGCAGACGTGGAACCCGGTTCGGAGATGTCTTATGGTCTGAATCTTCGACAGACAAGGAAGAGTGGTGGGGACGGTAAGCAATCTGCTGCTGGCAGTGGCGGTGGTGATGCTGGCGGTGATGATGATGGAAGATCACGACCTGTTTCTCTGGACGCTGTGGTGCAGCAGAAATTTAAAGACGATATGAAGAGGTTACCGGACGATAATGGATTTGAAGATTTCAAAGATGTACCTGTAGAGGGTTTTGGTGCAGCTCTGCTTGCTGGGTATGGATGGCGTGAAGGCATGGGTATTGGAAAGAATGCCAAGGAGGATGTAAAAGTTGTACAGTATGAGAGGAGAACTGCCAAAGAAGGGTTGGGTTATGTTGGCGATGGACTGAAGCGGAGTTTGAAGGAAGTGGAAATACCAAAGGAGCGTGGCAGAGATGGTTCGTTCGTGGGGAAGATTGTTAGAATAGTTGAGGGAAGAGATACAGGATTGAAAGGTAAAATTGTACGAAAAGTTGAAGATAAGTGGGTTATTTTAAAGCTTTTGAAGAGTGAAGAGGAAGTGAAAGTGGACATTGATGATATTGCAGAATTGGGTTCTGTTGAAGATGAGAGGTATTTGAAGAAATTGAGGGATTTAAAGATTCAACATGCTGATAAAGATAAAGATTCAAAGAATAAACGCTATAGCAATGAGGAAAGGAGAGGCCGTGGTGAAGTTGAAATAAATATTAAAAGAGATAGTAGGAAGGAAGAGCAGGGGAGGAAACAAGTTTCATGGCTTACAAGTCATATTCGGGTTAGGATTATTAGCAAAGATTTCAAGGGAGGGCGACTATATTTGAAGAAAGGAAAAGTTCTGGATGTTGTTGGGCCTACTACTTGTGATATATCTATGGATGACAGCAAGGAGATCATCCAAGGGGTTTCTCAAGACCTTCTTGAGACTGCTATCCCCCGCCGTGGGGGGCCAGTTCTTGTATTATGTGGTAAACACAAAGGCATTTATGGGAGTCTAGTTGAGAGGGATTTGGAGAGAGAGACTGGTGTTGTTAGGGACGCTGATACCCATGCACTGGTCAATGTGCGGCTTGAACATATTGCAGAGTATATAGGGGACCCAAGTTTCTTGGGATACTGA 1428 0.4419 MKLSFSMPSKSTSKSNSIKPSQKFDGAANNKDGNTKGREYVTEFDASKSPTDPNKSSGIVIPPMKNEWNEGRSRKRMKNLELPITESNGTELGFELDTSADVEPGSEMSYGLNLRQTRKSGGDGKQSAAGSGGGDAGGDDDGRSRPVSLDAVVQQKFKDDMKRLPDDNGFEDFKDVPVEGFGAALLAGYGWREGMGIGKNAKEDVKVVQYERRTAKEGLGYVGDGLKRSLKEVEIPKERGRDGSFVGKIVRIVEGRDTGLKGKIVRKVEDKWVILKLLKSEEEVKVDIDDIAELGSVEDERYLKKLRDLKIQHADKDKDSKNKRYSNEERRGRGEVEINIKRDSRKEEQGRKQVSWLTSHIRVRIISKDFKGGRLYLKKGKVLDVVGPTTCDISMDDSKEIIQGVSQDLLETAIPRRGGPVLVLCGKHKGIYGSLVERDLERETGVVRDADTHALVNVRLEHIAEYIGDPSFLGY 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1410 475 ProSiteProfiles G-patch domain profile. 178 224 IPR000467 GO:0003676
Dere07g1410 475 SMART G-patch_5 176 222 IPR000467 GO:0003676
Dere07g1410 475 MobiDBLite consensus disorder prediction 314 336 - -
Dere07g1410 475 Pfam G-patch domain 165 221 IPR026822 -
Dere07g1410 475 PANTHER G PATCH AND KOW-CONTAINING 1 471 IPR045166 GO:0000398
Dere07g1410 475 MobiDBLite consensus disorder prediction 1 29 - -
Dere07g1410 475 MobiDBLite consensus disorder prediction 1 146 - -
Dere07g1410 475 SMART kow_9 414 441 IPR005824 -
Dere07g1410 475 SMART kow_9 243 270 IPR005824 -
Dere07g1410 475 Gene3D - 360 414 - -
Dere07g1410 475 MobiDBLite consensus disorder prediction 110 124 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1410 356 448 C2H2 Transcription Factor Family AT1G55460 33.333 7.29e-06 46.2