Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1401 ATGATGGATGGAGTTTATGGCGGTGCGGCGAATTCGGCGGCGGCAAATGGGAATTCTCCGCCGCCATTCCTGAGCAAGACCTATGACATGGTGGACGACCCGTCCACCAACTCGGTGGTGTCATGGAGTGATAACAACAACAGCTTTGTTGTTTGGAGCGTGCCTGAATTCGCTAGGGACATCTTGCCTAAGTATTTTAAGCACAACAATTTCTCCAGCTTCGTCAGGCAGTTGAATACTTACGGTTTTAGAAAGGTTGACCCAGACCGCTGGGAATTTGCAAATGAAGGATTTTTGAGGGGTCAAAAACAACTTTTGAAGACCATCAGTAGGCGGAAATCTGCACAAGTAAATGGTAATCAACAACCATCTCTGGTGCAAAGCTCACCTGTTCAGGCATGTATTGAGGTGGGCAAGTTTGGCCCTGAGGAGGAGATTGAAATATTGAAAAGGGATAGGAATGTTCTAATGCAAGAACTTGTTAGGCTGAGACAAAAGCAGCAAGCAACTGATAACCAATTACAAAGTGTTGGGCAACGTGTGCAGGTTATGGAGCAGCGTCAGCAACAAATGATGTCATTTCTGGCTAAGGCCATGCAAAGTCCAGGCTTCTTGGCACAGTTTGTACAGCAGCAGAGAGACAGTAACAGACACATCACTGGAGGCAATAAGAAGAGGAGACTTCACAGGCAGGAGGAAGATACATTAGCTGCTGAGCATCTCTGTAATGCCCTTGACGGACATGTTGTTAAGTATCAACCTTCTATGAATGAGGCTGCAAAAGCATTATTGCGCCAGATATTGCAAATGAATGGTTCTACAAGGATGGAATCATCAATAAATAACCCTGATGCTTTCCTCATTGATGATGTTCCTTCTGCCATTCCATTAGATAGTGGGAGTTCCTCCAGTCGGGCTTCAGGAGTGACCCTTTCTGAGGTTATGCCTACTTCTGGCCAGTCTTATATGGCAGTGCAATCACAAATTCCTGTTAACTGTGTGGCCAATAGTGTATCTGAAATGCAGTCTTCCAGTGCTACATTGACTGACTGTGTGAAAGCAGCTGAATTTCCAGAATTAAATTTGCATAGTTGCCCAGACAATGTTTTGGATATCAGTAAAGTCCAGGGTGTGGAGACAGAAAGCAGCTTAGTCAATCCTGAACTAACTTTTGTGGGGCCTGATACTGGGAATGCAGGGGACATAGACATGATGTCAGCTGTTTTGGGTGGTACACAGTCTGTAGAAGTAGAAGCTGATGCCTTTTCGCCTGATCCAGATGGAATTTCTAAGCTCCCAAGCATTAATGATGTTTTCTGGGAACAGTTTCTCACAGCAAGCCCGCTTACAGGAGATACAGATGAAATTAATTCTTCCTCTCTTGGAGATGGTTTGACCGAAGACCAGGAATCTCCTTCTGAAAGGGAGAATGGAGGGGAAAAGATGAATGAGATAAAGCATGTTGACCATCTTACTCAACAGATGGGACTTCTTGCATCTCAGTCTTCTTAA 1512 0.4478 MMDGVYGGAANSAAANGNSPPPFLSKTYDMVDDPSTNSVVSWSDNNNSFVVWSVPEFARDILPKYFKHNNFSSFVRQLNTYGFRKVDPDRWEFANEGFLRGQKQLLKTISRRKSAQVNGNQQPSLVQSSPVQACIEVGKFGPEEEIEILKRDRNVLMQELVRLRQKQQATDNQLQSVGQRVQVMEQRQQQMMSFLAKAMQSPGFLAQFVQQQRDSNRHITGGNKKRRLHRQEEDTLAAEHLCNALDGHVVKYQPSMNEAAKALLRQILQMNGSTRMESSINNPDAFLIDDVPSAIPLDSGSSSSRASGVTLSEVMPTSGQSYMAVQSQIPVNCVANSVSEMQSSSATLTDCVKAAEFPELNLHSCPDNVLDISKVQGVETESSLVNPELTFVGPDTGNAGDIDMMSAVLGGTQSVEVEADAFSPDPDGISKLPSINDVFWEQFLTASPLTGDTDEINSSSLGDGLTEDQESPSERENGGEKMNEIKHVDHLTQQMGLLASQSS 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1401 503 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 16 328 IPR027725 -
Dere07g1401 503 ProSitePatterns HSF-type DNA-binding domain signature. 62 86 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere07g1401 503 SUPERFAMILY "Winged helix" DNA-binding domain 18 112 IPR036390 -
Dere07g1401 503 PRINTS Heat shock factor (HSF) domain signature 23 46 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere07g1401 503 PRINTS Heat shock factor (HSF) domain signature 61 73 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere07g1401 503 PRINTS Heat shock factor (HSF) domain signature 74 86 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere07g1401 503 Pfam HSF-type DNA-binding 23 112 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere07g1401 503 Coils Coil 146 166 - -
Dere07g1401 503 Gene3D - 15 113 IPR036388 -
Dere07g1401 503 MobiDBLite consensus disorder prediction 449 467 - -
Dere07g1401 503 MobiDBLite consensus disorder prediction 468 488 - -
Dere07g1401 503 SMART hsfneu3 19 112 IPR000232 GO:0003700|GO:0006355|GO:0043565
Dere07g1401 503 MobiDBLite consensus disorder prediction 449 503 - -
Dere07g1401 503 FunFam Heat shock transcription factor 1 16 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1401 Dere-ChrDere07 18347715 18354872 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1401 18 502 HSF AT5G16820 53.939 3.55e-157 454
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Dere07g1401 HSF_DNA-bind 1.2e-32 CL0123