Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1378 ATGGAAAGCGCTGACGATACCAAATCAAAGGATTATTACAAAGTGCTGGAGGTTGATTATGATGCAACTGATGAAAATATCAAATTAAATTACCGAAGGCTTGCACTGAAATGGCATCCTGACAAGCACAAAGGTGACAGTGCTGATACTGCAAAATTCCAAGAAATCAATGAAGCTTACAGTGTGTTGAGTGATCCGGCCAAACGCATTGAATATGATTTAACTGGAATCCATGAGATTGACAAGTATAGTTTGCAGGAATATCTTGCCAGATTCAAAGGGATGATACTTACCTGCAATGGACTTGGTATCAATCACACTCAAATATGGTCACAACAATTGATTGAAAGCATTGAATCCCTCGATAAATAA 372 0.379 MESADDTKSKDYYKVLEVDYDATDENIKLNYRRLALKWHPDKHKGDSADTAKFQEINEAYSVLSDPAKRIEYDLTGIHEIDKYSLQEYLARFKGMILTCNGLGINHTQIWSQQLIESIESLDK 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1378 123 FunFam Chaperone protein DNAj, putative 3 90 - -
Dere07g1378 123 ProSitePatterns Nt-dnaJ domain signature. 53 72 IPR018253 -
Dere07g1378 123 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 5 108 - -
Dere07g1378 123 Pfam DnaJ domain 11 73 IPR001623 -
Dere07g1378 123 SMART dnaj_3 10 68 IPR001623 -
Dere07g1378 123 CDD DnaJ 11 65 IPR001623 -
Dere07g1378 123 Gene3D DnaJ domain 1 90 IPR036869 -
Dere07g1378 123 SUPERFAMILY Chaperone J-domain 8 98 IPR036869 -
Dere07g1378 123 PRINTS DnaJ domain signature 68 87 IPR001623 -
Dere07g1378 123 PRINTS DnaJ domain signature 31 46 IPR001623 -
Dere07g1378 123 PRINTS DnaJ domain signature 13 31 IPR001623 -
Dere07g1378 123 PRINTS DnaJ domain signature 48 68 IPR001623 -
Dere07g1378 123 ProSiteProfiles dnaJ domain profile. 11 76 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1378 Dere-ChrDere07 17985792 17991353 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1378 1 73 C2H2 Transcription Factor Family AT1G74250 39.744 3.73e-11 57.0