Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1377 ATGAGCACCTCATCACAGGTTATCACATGCAAAGGCGCAGTTTGTTGGGGAATTGGGGAGGGAGTGAAGGTGGAAGAGATACAAGTTGAGCCACCAAAAGCATGTGAAGTTCGAGTCAAGATGCTTTGTGCCAGTGTCTGCCACACCGACATCTTCAGCCTTCATGGATTCCCACATGCTAATTATCCTCAAGTACTAGGACATGAAGGAGTCGGCATTGTGGAAAGCATGGGGGAGGAGGTGAGAAACGTGGAGGTCGGCGATACAGTAATTCCATTGTACATAGGAGAGTGCAAAGAATGCGAGGAGTGCGTGTCAGGGAAGACCAACCTATGCAGGAGGTACCCTATAAGGTTGAGCGGACTGATGCCGGACAATACTTCTAGAATGTCCGTGAGAGGCCAAAAGGCATACCATGTTCTGAGTGGTGCCACGTGGTGCGAGTACATGGTGGTCGATGCTAGCTACGTTATGAAAGTGGACCCCAACATTGACACAGCACACGCCAGCTTCATCTCCTGTGGCTTCTCCACTGGCTTTGGGAGTGCCTGGAAGGAAGCCATGGTTCATAAGGGCTCAAGCGTTGCTGTTATTGGTCTCGGTGCTGTTGGACTAGGGGCTGTGAGTGCAGCAAAAATATTGGGGGCAACAAAGATAATTGGGGTTGACAAAAATGAGAAGAAGAAGGAGAAAGGAAAAGTTTTTGGAATGACAGACTTCATACATGTTAATAAATCTGATAAATCTGTTTCGCAATTAATCAAAGAACTGACTGGTGGAATGGGAGTGGATTATTCCTTTGAGTGCACTGGAGTTGCCTCTTTGCTCAATGAAGCCATGGAATCCACCAAAGTGGGAGTGGGAAAGACTATAGCAGTTGGTTCAGGAGCTGAAGCTGTGCAGCTCAGTTTTGGTACCATTCTTTATGGCAGAACATTGAAGGGCTGTGTTTTTGGAGGCATAAAACCAAAGTCTGACCTTCCTTTTATAGTTCACAAGTGTAGGATGAAGGAAATCCCCATTCAAGAACTGTTGACCCATGAGGTTCCATTGGCAGACATAAGCAATGCATTTGAGCTATTGAAAGAGCCAGATTGTGTCAAAGTTGTGATCAAGATGTGA 1122 0.4652 MSTSSQVITCKGAVCWGIGEGVKVEEIQVEPPKACEVRVKMLCASVCHTDIFSLHGFPHANYPQVLGHEGVGIVESMGEEVRNVEVGDTVIPLYIGECKECEECVSGKTNLCRRYPIRLSGLMPDNTSRMSVRGQKAYHVLSGATWCEYMVVDASYVMKVDPNIDTAHASFISCGFSTGFGSAWKEAMVHKGSSVAVIGLGAVGLGAVSAAKILGATKIIGVDKNEKKKEKGKVFGMTDFIHVNKSDKSVSQLIKELTGGMGVDYSFECTGVASLLNEAMESTKVGVGKTIAVGSGAEAVQLSFGTILYGRTLKGCVFGGIKPKSDLPFIVHKCRMKEIPIQELLTHEVPLADISNAFELLKEPDCVKVVIKM 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1377 373 Gene3D - 179 316 - -
Dere07g1377 373 FunFam S-(hydroxymethyl)glutathione dehydrogenase 179 316 - -
Dere07g1377 373 PANTHER ALCOHOL DEHYDROGENASE 6 365 - -
Dere07g1377 373 SUPERFAMILY GroES-like 324 371 IPR011032 -
Dere07g1377 373 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 164 333 IPR036291 -
Dere07g1377 373 SUPERFAMILY GroES-like 3 186 IPR011032 -
Dere07g1377 373 SMART PKS_ER_names_mod 17 371 IPR020843 GO:0016491
Dere07g1377 373 FunFam alcohol dehydrogenase 1-like isoform X1 18 178 - -
Dere07g1377 373 CDD liver_alcohol_DH_like 8 372 - -
Dere07g1377 373 Pfam Alcohol dehydrogenase GroES-like domain 36 160 IPR013154 -
Dere07g1377 373 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 67 81 IPR002328 GO:0008270|GO:0016491
Dere07g1377 373 Gene3D - 14 368 - -
Dere07g1377 373 Pfam Zinc-binding dehydrogenase 202 320 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1377 Dere-ChrDere07 17959117 17966018 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1377 36 313 Monolignol Biosynthesis Gene Families AT4G37980 25.267 5.83e-15 72.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere07g1377 07 17959117 17966018 Dere07g1377 07 17959117 17966018 ECH