Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1376 ATGCCACCAGCTCAAGCACTCCATAAAGTTGGAGCTCTTAGCCACAGGATAAGAAAGAGAGAGAGAGAGCGAGAGAGAACCCATTCCAGCAAAATTTGCAAGCCAGATCCTCCATTTTTCTTCTGTTCTGAAGACTATAAGCTCAGTAAAATGTCAAGCTGCTCAAAAGTTATAACATGCAAAGGTGCAGTATGCTGGGGAATAGGGGAGGAAGTGAAGGTGGAAGAGATACAAGTTGAGCCACCAAAGGCATGTGAAGTTCGAGTTAAGATGCTTTGTGCCAGTGCTTGCCACACAGACATCTTGAGGGCTCGAGGATTTCCACATCCTAGTTTTCCTCAAGCACTAGGGCATGAAGGAGTAGGTGTTGTAGAGAGCATAGGAGAGGATGTGACAAATGTAAAAGAAGGAGATTTGGTGATTCCAACATACATAGGAGAGTGCCAAGAGTGTGAGAATTGTGTGTCTGGAGAATCTAACATTTGCATGAAGTATCCTCTAAGGGCAAATGGGCTGATGCCTGATGGCACATCAAGGATGTCCATAAGAGGGAAGATGGTGTACCATGTGTTTAACTGTTCCACATGGTGTGAATACATGGTGACTGATGCAAACTATGTTATTAAGGTTGATCCAAGCATTGATTTGGTTCATGCTAGTTTCATCTCCTGTGGCTTCTCCACCGGCTTTGGGGCTGCTTGGAAGGAAGCCAAAGTGAAATCTGGATCAACTGTGGCTGTTTTTGGCCTTGGAGCAGTTGGATTAGGGGCTATAAGTGGAGCCAGTATAATGGGGGCATCTAAGATAATTGGGGTGGACACCAATGAGATGAAGAGAGAAAAGGGAAAAGCTTTTGGAATGACAGACTTCATAAATCCCAATGACTCTAAGAAGCTTGTTTCAGAAATGGTGAAGGAGCTCACTGGTGGAGAAGGTGTGGATTACTCCCTTGAGTGCACTGGGTTTGCCCCTTTGCTCACTCAAGCCCTCCAATCCACCAAAGTGGGGAAAGGAAAAACAATTGTAATTGGCGTAGGAATTGAAGACTTTGTGCAAATCAATTGGTTTTCTCTTCTTCTTGGTAGAACTTTGCAGGGTTCCATTTTTGGAGGGTTAAAAGCCAAATCTGACCTCTCTATTATAGCTAGCAAATGCCTTAAAAAGGAACTCCCTCTTGATGAACTACTGACCCATGAAATCCCATTAACAGATATAAGCAAAGCATTTGAGCTAATGAAACAGCCAGATTGTGTCAAAGTTATCATTAGGATCTGA 1275 0.4361 MPPAQALHKVGALSHRIRKRERERERTHSSKICKPDPPFFFCSEDYKLSKMSSCSKVITCKGAVCWGIGEEVKVEEIQVEPPKACEVRVKMLCASACHTDILRARGFPHPSFPQALGHEGVGVVESIGEDVTNVKEGDLVIPTYIGECQECENCVSGESNICMKYPLRANGLMPDGTSRMSIRGKMVYHVFNCSTWCEYMVTDANYVIKVDPSIDLVHASFISCGFSTGFGAAWKEAKVKSGSTVAVFGLGAVGLGAISGASIMGASKIIGVDTNEMKREKGKAFGMTDFINPNDSKKLVSEMVKELTGGEGVDYSLECTGFAPLLTQALQSTKVGKGKTIVIGVGIEDFVQINWFSLLLGRTLQGSIFGGLKAKSDLSIIASKCLKKELPLDELLTHEIPLTDISKAFELMKQPDCVKVIIRI 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1376 424 FunFam alcohol dehydrogenase 1-like isoform X1 68 228 - -
Dere07g1376 424 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 214 382 IPR036291 -
Dere07g1376 424 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 117 131 IPR002328 GO:0008270|GO:0016491
Dere07g1376 424 SUPERFAMILY GroES-like 375 422 IPR011032 -
Dere07g1376 424 Gene3D - 229 367 - -
Dere07g1376 424 PANTHER ALCOHOL DEHYDROGENASE 56 416 - -
Dere07g1376 424 Gene3D - 64 419 - -
Dere07g1376 424 CDD liver_alcohol_DH_like 58 423 - -
Dere07g1376 424 SUPERFAMILY GroES-like 55 241 IPR011032 -
Dere07g1376 424 FunFam S-(hydroxymethyl)glutathione dehydrogenase 229 367 - -
Dere07g1376 424 Pfam Zinc-binding dehydrogenase 252 372 IPR013149 -
Dere07g1376 424 SMART PKS_ER_names_mod 67 422 IPR020843 GO:0016491
Dere07g1376 424 Pfam Alcohol dehydrogenase GroES-like domain 86 210 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1376 Dere-ChrDere07 17945983 17957907 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1376 86 416 Monolignol Biosynthesis Gene Families AT2G21730 27.193 5.14e-18 83.6