Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1344 ATGAGCGACGAAGACAAATCCAAAGCCCTCTCTGGCGACCCCCACCACCATCACCATCCTCCGCCGCAGCAATACACGCCTCCTCAGTACGGCACCTTCCAAGGTGTCTCCAACTATCCTCCGCAGCCACAGCCCGCGATCGGCTTCCCTCAGCCGGTCCCACCTCCTGGCGCTGTTGATCAATCTGGTCATCCGTATTACGCTCCTGGCTACCAAGCGGTTCCACCTGGTTATGCAGTTGCTGAAGGAACACCTGTGAGAGAGCGCCGACTACCTTGTTGTGGTCTTGGCTGTGGTTGGTGCCTGTTTATAATAGGTTTCTTCCTTGGTGCAATCCCTTGGTATGTTGGGGCAATACTTCTACTTTGTTCGAGAAGAATAGACTACCGAGAGAAACCCGGATATATTGCTTGTACAATTGCTGCTGTTCTTGCTACAATAGCAATTATTCTTGGTGTGACTATGGGAGAACGTGATTGA 480 0.5188 MSDEDKSKALSGDPHHHHHPPPQQYTPPQYGTFQGVSNYPPQPQPAIGFPQPVPPPGAVDQSGHPYYAPGYQAVPPGYAVAEGTPVRERRLPCCGLGCGWCLFIIGFFLGAIPWYVGAILLLCSRRIDYREKPGYIACTIAAVLATIAIILGVTMGERD 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1344 159 PANTHER 60S RIBOSOMAL PROTEIN L18A-LIKE 1 157 IPR044804 -
Dere07g1344 159 MobiDBLite consensus disorder prediction 43 59 - -
Dere07g1344 159 MobiDBLite consensus disorder prediction 1 20 - -
Dere07g1344 159 MobiDBLite consensus disorder prediction 1 65 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1344 Dere-ChrDere07 17543881 17555375 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1344 3 154 Cytoplasmic Ribosomal Protein Gene Family AT1G29970 35.468 1.99e-26 97.4