Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1317 ATGAATTTGCCGCGCGGGTTTCGATTTTCTCCCACAGATGGAGAACTGATCTTCCATTACTTGGCCAAGAGGGTGTTCGGTGGGGAACTTCCTATTCATGACGAAATCATCAGAGAGATTGATGTGTACGAAGTTGATCCTCATCAACTTCCTCTCTGTAAGCAAACGTATGCCAATAAGAAAGAAGAATACTACTTCACCACCACAGAACCAACAAAAAGATCTGAAGGTACGCATACAATTCGGTTCACTAAGCATGGCTACTGGAAGCAGATTGAAAAAGATGAGCTGGTGATGCACAAAGAGGAAATTGTTGGGTTCAAGAAAGAATTCATCTTCTGCTGCGGACAGCCACCTTTTGGAGCACAAACTAAGTGGGTCATGAGTGAGTATTGGCTCATTTCCAGTGGGTTCCCCCATGAAACTTTTGATGATATTGTTCTTACTAAGGCTGAGGAAGAGAGTTCATGA 471 0.4331 MNLPRGFRFSPTDGELIFHYLAKRVFGGELPIHDEIIREIDVYEVDPHQLPLCKQTYANKKEEYYFTTTEPTKRSEGTHTIRFTKHGYWKQIEKDELVMHKEEIVGFKKEFIFCCGQPPFGAQTKWVMSEYWLISSGFPHETFDDIVLTKAEEESS 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1317 156 SUPERFAMILY NAC domain 1 150 IPR036093 GO:0003677|GO:0006355
Dere07g1317 156 ProSiteProfiles NAC domain profile. 3 154 IPR003441 GO:0003677|GO:0006355
Dere07g1317 156 PANTHER NAC TRANSCRIPTION FACTOR 56 1 154 - -
Dere07g1317 156 Pfam No apical meristem (NAM) protein 4 132 IPR003441 GO:0003677|GO:0006355
Dere07g1317 156 Gene3D NAC domain 12 156 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1317 Dere-ChrDere07 17227022 17228757 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1317 1 133 NAC Transcription Factor Family AT3G03200 41.353 4.55e-27 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere07g1317 NAM 2.5e-23 No_clan