Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Dere07g1316 | ATGAATTTGCCGTGCGGGTTTCGATTTTCTCCCACTGATGGAGAACTGATCTTCCATTACATGGCCGAGAAGGTGTTCGGTAGGGCACTTGCTGTTGATAATGATATCATCAGTGAGATTGATGTGTACGAAGTTGATCCTCATCAACTTCCTCTCTGCGAGAAAACGTATGCAAATGACAAGGAAGAATACTACTTCACCACCACAGAACCAACAAAAAGATCAGAAAGAGCGAACACGATTCGTTTCACTAAGCATGGTTACTGGAAGCAGATCGAGGATGATGCGTTTATAATGCACAAAGAGGAAATTGTTGGGTTCAAGAAAGAATTCATCTTCTGTTGGGGACACCCTCCATTTGGACTACAAACTCGTTGGGTCATGAGTGAGTGTAGGCTCATTTCCAGTGGATTCCCAAATGAAACTCTGGATGATTCTGTTCTCGACAAGATTGAGACTAATGCAATTTGTAGGCTGAGGAAGAGAGCTGATGATTACGTTGCTGCTGGAGACGACACTTGGAACTATCATCCAAACCCTGGCTGTAATCTGTCTTCGTGTGAGGATCAGGATATATCAGTTTCTATATCCATCACCAATACCTCCAATCATTCTACTCTCACCATTGAATCCCCTCGCGTGTTGATCGAGCTTCCACCCCCTTCCAGCAACTCGTTGATGGAAGAACAACCTTCAGATAATCACCTTTGCAGTCATGTTTTGTTGTAA | 729 | 0.4362 | MNLPCGFRFSPTDGELIFHYMAEKVFGRALAVDNDIISEIDVYEVDPHQLPLCEKTYANDKEEYYFTTTEPTKRSERANTIRFTKHGYWKQIEDDAFIMHKEEIVGFKKEFIFCWGHPPFGLQTRWVMSECRLISSGFPNETLDDSVLDKIETNAICRLRKRADDYVAAGDDTWNYHPNPGCNLSSCEDQDISVSISITNTSNHSTLTIESPRVLIELPPPSSNSLMEEQPSDNHLCSHVLL | 242 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Dere07g1316 | 242 | ProSiteProfiles | NAC domain profile. | 3 | 162 | IPR003441 | GO:0003677|GO:0006355 | |
| Dere07g1316 | 242 | Pfam | No apical meristem (NAM) protein | 4 | 132 | IPR003441 | GO:0003677|GO:0006355 | |
| Dere07g1316 | 242 | SUPERFAMILY | NAC domain | 1 | 151 | IPR036093 | GO:0003677|GO:0006355 | |
| Dere07g1316 | 242 | PANTHER | NAC TRANSCRIPTION FACTOR 56 | 1 | 176 | - | - | |
| Dere07g1316 | 242 | Gene3D | NAC domain | 12 | 167 | IPR036093 | GO:0003677|GO:0006355 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Dere07g1316 | Dere-ChrDere07 | 17211951 | 17216410 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Dere07g1316 | 1 | 162 | NAC Transcription Factor Family | AT1G54330 | 39.024 | 4.82e-24 | 95.9 |
Transcription factors information