Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1314 ATGGATTTGCCGCGCGGGTTTCGATTTTCTCCCACAGATGGAGAACTGATCTTCCATTACTTGGCCAAGAGGGTGTTCGGTGGGGAACTTCCTATTGATGACAAAATCATCAGAGAGATTGATGTGTACGAAGTTGATCCTCATCAACTTCCTCTCTGTAAGCAAACGTATGCCAATAAGAAAGAAGAATACTACTTCACCACCACAGAACCAACAAAAAGATCTGAAGATTGA 234 0.4274 MDLPRGFRFSPTDGELIFHYLAKRVFGGELPIDDKIIREIDVYEVDPHQLPLCKQTYANKKEEYYFTTTEPTKRSED 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1314 77 Pfam No apical meristem (NAM) protein 4 70 IPR003441 GO:0003677|GO:0006355
Dere07g1314 77 Gene3D NAC domain 12 77 IPR036093 GO:0003677|GO:0006355
Dere07g1314 77 PANTHER NAC TRANSCRIPTION FACTOR 56 1 70 - -
Dere07g1314 77 ProSiteProfiles NAC domain profile. 3 77 IPR003441 GO:0003677|GO:0006355
Dere07g1314 77 SUPERFAMILY NAC domain 2 71 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1314 Dere-ChrDere07 17135504 17137205 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1314 3 67 NAC Transcription Factor Family AT3G04070 46.154 1.30e-11 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere07g1314 NAM 7.3e-13 No_clan