Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1312 ATGAATTTGCCGTGCGGGTTTCGATTTTCTCCCACTGATGGAGAACTGATCTTCCATTACATGGCCGAGAAGGTGTTCGGTAGGGCACTTGCTGTTGATGACGATATCATCAGAGAGATTGATGTGTACGAAGTTGATCCTCATCAACTTCCTCTCTGCGAGAAAACGTATGCAAATGACAAGGAAGAATACTACTTCACCCCCACAGAACCAACAAAAAGATCAGAAAGAGCGAACACGATTCGTTTCACTAAGCATGGTTACTGGAAGCAGATCGAGGATGATGCGTTTATAATGCACAAAGAGGAAATTGTTGGGTTCAAGAAAGAATTCATCTTCTGTTGGGGACACCCTCCATTTGGACTACAAACTCGGTGGGTCATGAGTGAGTGTAGGCTCATTTCCAGTGGATTCCCAAATGAAACTCTGGATGATACTGTTCTCGACAAGATTGAGACTAATGCAATTTGTAGGCTGAGGAAGAGAGCTGATGATTACGTTGCTGCTGGAGACGAGTTTGTTCAGGTTCACACTGTTAGTGTCAATCAAAGTCAAAGGAGATTAGTTCATGCAGCCATGAAGTCTTCTGCAGAGGGACATCTGAAAGAAGAGATTCTTGAAATGGATTTATGTCTAACTGATGAAGATTCAAATGCTAGTAGAGAAGATAATTCGTCTGATGCAAGATAA 690 0.4246 MNLPCGFRFSPTDGELIFHYMAEKVFGRALAVDDDIIREIDVYEVDPHQLPLCEKTYANDKEEYYFTPTEPTKRSERANTIRFTKHGYWKQIEDDAFIMHKEEIVGFKKEFIFCWGHPPFGLQTRWVMSECRLISSGFPNETLDDTVLDKIETNAICRLRKRADDYVAAGDEFVQVHTVSVNQSQRRLVHAAMKSSAEGHLKEEILEMDLCLTDEDSNASREDNSSDAR 229
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1312 229 Pfam No apical meristem (NAM) protein 4 132 IPR003441 GO:0003677|GO:0006355
Dere07g1312 229 PANTHER NAC TRANSCRIPTION FACTOR 56 1 177 - -
Dere07g1312 229 SUPERFAMILY NAC domain 1 151 IPR036093 GO:0003677|GO:0006355
Dere07g1312 229 Gene3D NAC domain 12 166 IPR036093 GO:0003677|GO:0006355
Dere07g1312 229 ProSiteProfiles NAC domain profile. 3 162 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1312 Dere-ChrDere07 17097592 17103907 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1312 1 173 NAC Transcription Factor Family AT1G52890 36.000 2.31e-25 99.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere07g1312 NAM 1.4e-19 No_clan