Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1311 ATGGGCGAGAAAACGTATGCAAATGACAAGGAAGAATACTACTTCACCACCACAGAACCAACAAAAAGATCAGAAAGAGCGAACACGATTCGTTTCACTAAGCATGGTTACTGGAAGCAGATCGAGGATGATGCGTTTATAATGCACAAAGAGGAAATTGTTGGGTTCAAGAAAGAATTCATCTTCTGTTGGGGACACCCTCCATTTGGACTACAAACTCGTTGGGTCATGAGTGAGTGTAGGCTCATTTCCAGTGGATTCCCAAATGAAACTCTGGATGATACTGTTCTCGACAAGATTGAGACTAATGCAATTTGTAGGCTGAGGAAGAGAGCTGATGATTACGTTGCTGCTGGAGACGACACTTGGAACTATCATCCAAACCCTGGCTGTAATCTGTCTTCGTGTGAGGATCAGGATATATCAGTTTCTATATCCTTCACCAATACCTCCAATCATTCTACTCTCACCATTGAATCCCCTCGCGTGTTGATCGAGCTTCCACCCCCTTCCAGCAACTCGTTGATGGAAGAACAACCTTCAGATAATCACCTTTGCAGTCATGTTTTGTTGTAA 576 0.434 MGEKTYANDKEEYYFTTTEPTKRSERANTIRFTKHGYWKQIEDDAFIMHKEEIVGFKKEFIFCWGHPPFGLQTRWVMSECRLISSGFPNETLDDTVLDKIETNAICRLRKRADDYVAAGDDTWNYHPNPGCNLSSCEDQDISVSISFTNTSNHSTLTIESPRVLIELPPPSSNSLMEEQPSDNHLCSHVLL 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1311 191 ProSiteProfiles NAC domain profile. 1 111 IPR003441 GO:0003677|GO:0006355
Dere07g1311 191 PANTHER NAC TRANSCRIPTION FACTOR 56 8 126 - -
Dere07g1311 191 Pfam No apical meristem (NAM) protein 8 81 IPR003441 GO:0003677|GO:0006355
Dere07g1311 191 Gene3D NAC domain 2 113 IPR036093 GO:0003677|GO:0006355
Dere07g1311 191 SUPERFAMILY NAC domain 7 100 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1311 Dere-ChrDere07 17045829 17049492 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1311 11 145 NAC Transcription Factor Family AT1G56010 30.882 2.28e-12 62.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Dere07g1311 NAM 1.1e-05 No_clan