Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1307 ATGTTCAGTTTTCTCAGCAAAACCTTCCCTATTCAGAGGCATATTCTCAACGCCAACTCTCCTTCAACAATTCGAGGAGTGCTTTCTTTACAAACTCAATGGTTGTTATCTGCGAGGTACTCTAATTCGAACTCATCGAATTCTTTCGGAGTCTCATATCTCATTGGCACGTGTGGGTTCTCACCCGAGGAAGCTGTTTCAGTTTCGAAGTATGTCAACTTCGAAACGCGAGAAAAACCAGATTTGGTTATCAAGTTCTTGAAGAATCAAGGATTCTCGCAGACCCAGATTTTTCGTTTTATTAGAGAATTCCCACAGGGTCTTCGATATGATCCTGAGAAAAACTTTCTGCCCAAGATTGAGTTTTTCAAATCCAGAGGCGTATCGAGCTCAGACATCCCTAGGCTCATATGTAGTTGTCCTAGCATCATGAGAAGAAGCTTAAGTAAGCAGCTTATTCCTTCCTTTGATTTCTTTCGTGATTTATTTCAATCGGATGACAAGTTCATTAAAGTTGTTACAAACTTCTCGGGCATTCTTCTTGATATTAAAACCCATGCCTTGCCTAATATGAAGCTATTGAGAGCAGTAGGAGTTCTCGAAGCAAATGTTATCAGATTGTTACAAGTTTATCCTAGGACATTGACTAAAAATCCTGGTCGATTTAAGGAGATTGTGGAGGAAGTGAAGGAAATGGGGTTTAGTCCTTCGAGATTTCAATTTCTTATGGCCGTTTATGCGTTGTCATCACTGAGCAAATCTACATGGTCAAAAAAGGCTGATGTTTATAAGAAGTGGGGTTGGTCTGACAATGACATTCTTGCAGCATTTAGAAGGTCCCCATCTTGTATGAAGGCATCAGAGGATAAGATTGACGCAGTAATGCAGTTTCTTGTTAAAAAATTGGGCTATCAATCTTCCAATATTGCCCGATATCCATTAGTTCTGTCATATAGTTTGAATAAACGACTTATTCCAAGGGGTTCTGTCTTTCAAGTTTTGTTGTCAAAGGGTCAGGTGAAAATGGAAAGCTTGCTGCCAATGTTTATATGCACAGAAAGGGTCTTTTTGAAGAGGTTTATCCTGCGTCATGAGAAGAAAGCTAGTCAACTAATGAAGCTTTATCAGGCTAAACTGGATCTTGCGAGGTGA 1152 0.3976 MFSFLSKTFPIQRHILNANSPSTIRGVLSLQTQWLLSARYSNSNSSNSFGVSYLIGTCGFSPEEAVSVSKYVNFETREKPDLVIKFLKNQGFSQTQIFRFIREFPQGLRYDPEKNFLPKIEFFKSRGVSSSDIPRLICSCPSIMRRSLSKQLIPSFDFFRDLFQSDDKFIKVVTNFSGILLDIKTHALPNMKLLRAVGVLEANVIRLLQVYPRTLTKNPGRFKEIVEEVKEMGFSPSRFQFLMAVYALSSLSKSTWSKKADVYKKWGWSDNDILAAFRRSPSCMKASEDKIDAVMQFLVKKLGYQSSNIARYPLVLSYSLNKRLIPRGSVFQVLLSKGQVKMESLLPMFICTERVFLKRFILRHEKKASQLMKLYQAKLDLAR 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1307 383 Gene3D Transcription termination factor 3, mitochondrial 165 370 IPR038538 -
Dere07g1307 383 Pfam mTERF 84 236 IPR003690 GO:0003690|GO:0006355
Dere07g1307 383 Pfam mTERF 250 356 IPR003690 GO:0003690|GO:0006355
Dere07g1307 383 PANTHER CGI-12 PROTEIN-RELATED 45 364 IPR003690 GO:0003690|GO:0006355
Dere07g1307 383 FunFam Mitochondrial transcription termination factor-like 148 368 - -
Dere07g1307 383 SMART mt_12 274 305 IPR003690 GO:0003690|GO:0006355
Dere07g1307 383 SMART mt_12 205 235 IPR003690 GO:0003690|GO:0006355
Dere07g1307 383 SMART mt_12 98 129 IPR003690 GO:0003690|GO:0006355
Dere07g1307 383 SMART mt_12 306 340 IPR003690 GO:0003690|GO:0006355
Dere07g1307 383 SMART mt_12 134 165 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1307 Dere-ChrDere07 16890208 16891359 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Dere07g1307 mTERF 6e-20 No_clan