Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1295 ATGATTTCATCACCCAAGGAGATTAGCTTGAAATCCTACTTTCCAGCCTTCTCAAATTTGCTTCGCGGGAGACTTCCCAAGTGTGGGTTGCCCCAAGTGAATGTTGAAGGTGCTACTCATAAGAAGCAAATCAAAGATTTAAGCCTTGGGAGGCGTGTATTCGATGTCTACATTCAGGGAGAGCAAAGGATAAAGGATTTCAATATTGCAAATGAAGCAGGAGGAGTTGGGAAGCCAGTCATAAGAAATTTTACTATTAATGTGACTAGCCAAACGTTAGAGATCCGCCTCTATTGGGCTGGGAAAGGGACAACAGCTATCCCCGAAAAATCAGTTTATGGCCCTCTAATATCAGCTATATCTGTAAATCCTGACTTTGAACCCCCAAAGGCAATAAGGAGCATACCTGGAGGGGTTGTCGCTGCAATTGTGGCTACGGGAGTATTTATTGTCATCTTGACATTGGGCATACTTTGGTGGAGATTTTCTGTAGGAAAGAGAACTTCATTAGCAATAGAGCTAAAGGATTTAGATTTGCAAACTGGTTTATTTACCTTACGCCAAATCAAAGCAGCAACAAACAACTTTGATATATCCAATAAGATTGGAGAAGGAGGGTTTGGTCCTGTTTACAAGGGCTTTCTATCAGATGGCTCAATAGTAGCAGTCAAGCAGCTTTCCTCTAAATCAAAGCAAGGAAACCGTGAGTTTATAAATGAGATAGGCATGATCTCTGCTTTGCAGCACCCTTGTCTTGTTAAACTCTATGGTTGTTGTGTTGAGCGAGATCAGTTGTTGCTGGTATATGAATACATGGAAAACAACAGCCTTGCTCGTGCTTTGTTTGGCCCAGAAGAAAGCCGTCTAAAACTGGATTGGCCAACAAGGCAAAAGATCTGTGTTGGTATTGCTAGAGGTTTGGCTTTCCTACATGAAGAATCAAGACTGAAGGTCGTGCACAGGGACATCAAGGCCACTAATGTGCTGCTTGACAAAGACCTGAATGCAAAAATATCTGATTTTGGTTTGGCCAAGCTTGATGAGGAGGAAAATACCCACATAAGTACACGAATAGCTGGGACCTATGGATATATGGCTCCCGAATATGCAATGCATGGATATTTGACTGACAAAGCAGATGTCTATAGTTTTGGAATTGTTGCCTTGGAAATTGTAAGTGGAAGGTGTAACACCGTTCGCGGGCAAAAGGAAGAATGTTTTTTTCTTCTTGACTGGGCACATGTTTTGAAAGCGAATGGCTATCTAATGGAGCTAGTTGATAGAAGGTTGGGTTCAGATTTTGACAGAGTGGAGGCAATGGTGATGATCAATGTGGCTTTGCTATGCACCAATCCTTCTTCATCCCTTAGGCCCGCCATGTCTTCAGTGGTAAGCATGCTTGAAGGCAGGACAGTGGTTCCAGAGTTCGTTTCAGATCACAGTGAGGATGCAAGTAAGATGAAGTTGGAGGCAATGCAAAAGTATTACAAAGTAATTGAAGAAAATCAGACAAGTGAGACTGACACTCACACTAGGAGTCTTTTGGGGCCCTCGACTAGTTCATCCACACCAGCTGCAGATCTCTATCCCGTCCGTCTTGATTCTTCGTACTGGGAGAAAAGAACTTAG 1629 0.4285 MISSPKEISLKSYFPAFSNLLRGRLPKCGLPQVNVEGATHKKQIKDLSLGRRVFDVYIQGEQRIKDFNIANEAGGVGKPVIRNFTINVTSQTLEIRLYWAGKGTTAIPEKSVYGPLISAISVNPDFEPPKAIRSIPGGVVAAIVATGVFIVILTLGILWWRFSVGKRTSLAIELKDLDLQTGLFTLRQIKAATNNFDISNKIGEGGFGPVYKGFLSDGSIVAVKQLSSKSKQGNREFINEIGMISALQHPCLVKLYGCCVERDQLLLVYEYMENNSLARALFGPEESRLKLDWPTRQKICVGIARGLAFLHEESRLKVVHRDIKATNVLLDKDLNAKISDFGLAKLDEEENTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIVSGRCNTVRGQKEECFFLLDWAHVLKANGYLMELVDRRLGSDFDRVEAMVMINVALLCTNPSSSLRPAMSSVVSMLEGRTVVPEFVSDHSEDASKMKLEAMQKYYKVIEENQTSETDTHTRSLLGPSTSSSTPAADLYPVRLDSSYWEKRT 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1295 542 CDD STKc_IRAK 202 469 - -
Dere07g1295 542 SMART serkin_6 196 465 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g1295 542 Pfam Malectin domain 48 120 IPR021720 -
Dere07g1295 542 Gene3D - 35 125 - -
Dere07g1295 542 MobiDBLite consensus disorder prediction 508 526 - -
Dere07g1295 542 FunFam Putative LRR receptor-like serine/threonine-protein kinase 272 479 - -
Dere07g1295 542 Gene3D Phosphorylase Kinase; domain 1 163 271 - -
Dere07g1295 542 Gene3D Transferase(Phosphotransferase) domain 1 272 491 - -
Dere07g1295 542 ProSitePatterns Serine/Threonine protein kinases active-site signature. 318 330 IPR008271 GO:0004672|GO:0006468
Dere07g1295 542 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 165 271 - -
Dere07g1295 542 SUPERFAMILY Protein kinase-like (PK-like) 179 476 IPR011009 -
Dere07g1295 542 ProSiteProfiles Protein kinase domain profile. 196 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g1295 542 MobiDBLite consensus disorder prediction 502 527 - -
Dere07g1295 542 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 45 500 - -
Dere07g1295 542 Pfam Protein kinase domain 198 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1295 Dere-ChrDere07 16723152 16726875 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1295 48 521 Receptor kinase-like Gene Family AT1G53440 62.448 0.0 588
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere07g1295 Pkinase 5.6e-47 CL0016