Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1293 ATGAAGATTCCATCCTCCTCTCTCCTCATTCTGCACCTCACCTTCTCCTTCGCATCACTTCTTCAAGCCCAGCATCTTGCACCAGAAGAGAAGCAAGCTCTTCAAGACATAGCTAACACACTCGGGAAGAAGGATTGGGACTTCCAAGTAGAGCCGTGCAGTAAGCGAGGAACGTGGTACGTCGAGGAAAATGAAAACGCCGTTACCTGCAATTGCTCTATTGCCAATGATACCTTCTGCCATGTCGTCAGCATATTTCTGAAACGACAAAATCTCCCTGGCAAACTCCCATCATCAGAACTGGTTAGGTTGCCTTACCTTCAAGAAATGGTCCTCGAGTTCAATGAATTTTCTGGAAATCTTCCTCCAGAGCTTGGGAATCTTACCCACATTGAAACACTCCTTCTTACCTCCAACAACTTCACTGGAGAGTTACCTCGAGAATTAGCAAAGCTTACTGCATTGAATCACGTGAGAATAAGTGACTTAAACGGACCTGATTCAACATTTCCACAACTTAAAAATACGAAAAACTTGATTACATTATATTTAACTGGAAACCTTCTCACTGGGACCGTGCCTAATTGGACACAGAGAGTTAAAAACATGAACTTGTTTGCGAACCCTTTGAAGAGCAACAACTCAGGAAGTTTTCCATGTATGGGAAGCACTGACTGTCCTACAAGTCCATTAGTTTCACCTTTATCATTCTTGCAGAAGAATATAACTGATTATAGCACAATTATGTGTTTTGAAGGAAGGCAATCGCCTAGGTCTAATCATATTCATGTGCCTCTTGCTCATGGAGCTGACTTTTACTCTCTCCACATAAATTGTGGGGGAAAGCAGGAAACAATTGGAAATACAACATATGATGATGATTCGGATCTAGCTCGAGCAGCAAAATTCAAAGAGCCTCCTTTTGGAACAAACTGGGCATTCAGCAGTACTGATTGGATTGAAATATTGCAGAGAAAGCTAATGCTGAAGGATTTCAACATAGCACATGATGCACAAGGAGTTGGTAAGGCAGTCATAAAAAATTTTACTGTTAATGTGACCAACAATACGTTAGAGATCCGCTTCTATTGGGCTGGGAAAGGGACAACTGGCATCCCACAATATTCAGTATATGGTCCTCTTATATCTGCTATATCTATAAAATCTGACTTTGAACCCCCATCAGAAAATGGAAGTACTATACCTGGAGATTTGAAAAATGGAAGGAGCATAACTGGAGGGGCAGTGGCTGCAATTGTGGCTTCAGGAGTGATTGTTGTCATCCTTGTATTTGGTCTACTTTGGTGGAAAGGCATTCTAGGGAAGAAAAATTCATTAGCACAAGAGCTAAAGAATTTAGATCTGCAAACTGGTTTATTTACCTTACGGCAGATCAGAGCAGCAACAAATAACTTTGATATATCCAATAAGATTGGAGAAGGAGGGTTTGGTCCTGTTTATAAGGGCTTTTTATCAGATGGCTCAATAATAGCAGTCAAGCAGCTTTCCTCTAAATCAAAGCAAGGAAACCGCGAGTTTATAAATGAGATAGGCATGATCTCTGCTTTGCAACACCCTTGTCTTGTTAAACTCTATGGTTGTTGTGTTGAGGGCGATCAGTTGTTGCTGGTATATGAATACTTGGAAAACAATAGCCTAGCACGCACTTTGTTTGGCCCAGAAGAATGCCGTTTAACTTTGGATTGGCCAACAAGGCAAAAGATCTGTGTTGGTATTGCTAGAGGTCTGGCTTTCCTCCATGAAGAATCAAGACTGAAGATTGTTCACAGGGACATCAAGGCCACTAATGTGTTGCTTGATAAAGATCTGAATGCCAAAATATCTGATTTTGGTTTGGCCAAACTTGATGAAGAGGACAATACCCATATAAGCACCAGAATAGCTGGGACCTATGGATATATGGCTCCTGAATATGCAATGCATGGTTATTTGACTGAAAAAGCAGATGTTTATAGTTTTGGAATTGTTGCCTTGGAAATAGTGAGTGGAAGGAGTAACACCACTCGCCAACAAAAAGGAGAATGCTTCCATCTTCTTAATTGGGCACTTCTCTTGAAAGAAAATGGTTATTTATTGGAGCTAGTTGATCGAAGATTGGGTTCAGCTTATAACGAAGAAGAGGTAGAGGTGATGATCAATGTGGCTCTCCTATGCACAAATGCCTCTTCATCGCTTAGGCCCACTATGTCTTCAGTGGTAAGCATGCTTGAAGGCAGAACAGTGGTTCCAGAGTTGGTTTCAGATCAAAGTGAGGATGCGGATATGAAGAAGTTGGAGGCAATGCGAAAGTATTACCAAAAGATGGAAGAAAATCAGACAAGTGAGACTGACACTCAAACTAAGAGTCTCTTAGGGCCGTCGACTGGATCATCAACATCAGCTCTAGATCTTTATCCTGTCCAACCTGACTCTTCTTACTATGAGGAAAGAAATTAG 2457 0.4131 MKIPSSSLLILHLTFSFASLLQAQHLAPEEKQALQDIANTLGKKDWDFQVEPCSKRGTWYVEENENAVTCNCSIANDTFCHVVSIFLKRQNLPGKLPSSELVRLPYLQEMVLEFNEFSGNLPPELGNLTHIETLLLTSNNFTGELPRELAKLTALNHVRISDLNGPDSTFPQLKNTKNLITLYLTGNLLTGTVPNWTQRVKNMNLFANPLKSNNSGSFPCMGSTDCPTSPLVSPLSFLQKNITDYSTIMCFEGRQSPRSNHIHVPLAHGADFYSLHINCGGKQETIGNTTYDDDSDLARAAKFKEPPFGTNWAFSSTDWIEILQRKLMLKDFNIAHDAQGVGKAVIKNFTVNVTNNTLEIRFYWAGKGTTGIPQYSVYGPLISAISIKSDFEPPSENGSTIPGDLKNGRSITGGAVAAIVASGVIVVILVFGLLWWKGILGKKNSLAQELKNLDLQTGLFTLRQIRAATNNFDISNKIGEGGFGPVYKGFLSDGSIIAVKQLSSKSKQGNREFINEIGMISALQHPCLVKLYGCCVEGDQLLLVYEYLENNSLARTLFGPEECRLTLDWPTRQKICVGIARGLAFLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLDEEDNTHISTRIAGTYGYMAPEYAMHGYLTEKADVYSFGIVALEIVSGRSNTTRQQKGECFHLLNWALLLKENGYLLELVDRRLGSAYNEEEVEVMINVALLCTNASSSLRPTMSSVVSMLEGRTVVPELVSDQSEDADMKKLEAMRKYYQKMEENQTSETDTQTKSLLGPSTGSSTSALDLYPVQPDSSYYEERN 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1293 818 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 441 547 - -
Dere07g1293 818 SUPERFAMILY Protein kinase-like (PK-like) 455 749 IPR011009 -
Dere07g1293 818 MobiDBLite consensus disorder prediction 778 806 - -
Dere07g1293 818 ProSitePatterns Serine/Threonine protein kinases active-site signature. 594 606 IPR008271 GO:0004672|GO:0006468
Dere07g1293 818 Pfam Protein tyrosine and serine/threonine kinase 474 743 IPR001245 GO:0004672|GO:0006468
Dere07g1293 818 SMART serkin_6 472 743 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g1293 818 SUPERFAMILY L domain-like 58 218 - -
Dere07g1293 818 Gene3D Phosphorylase Kinase; domain 1 439 547 - -
Dere07g1293 818 FunFam Putative LRR receptor-like serine/threonine-protein kinase 548 755 - -
Dere07g1293 818 Gene3D Transferase(Phosphotransferase) domain 1 548 769 - -
Dere07g1293 818 Gene3D - 320 390 - -
Dere07g1293 818 MobiDBLite consensus disorder prediction 771 818 - -
Dere07g1293 818 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 323 779 - -
Dere07g1293 818 ProSiteProfiles Protein kinase domain profile. 472 752 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g1293 818 Gene3D Ribonuclease Inhibitor 27 240 IPR032675 -
Dere07g1293 818 CDD STKc_IRAK 478 745 - -
Dere07g1293 818 Pfam Malectin domain 323 385 IPR021720 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1293 Dere-ChrDere07 16672480 16685521 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1293 26 773 Receptor kinase-like Gene Family AT1G53420 42.781 0.0 635
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere07g1293 PK_Tyr_Ser-Thr 1.1e-46 CL0016