Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1292 ATGGAGTCTGCGATTTCAAGCTCTAAACTTTTCTACGTTATAGTACTGTGGTGCTTCGCTTTGAATGCCTTCAGGGACTATGGATCCAACGCTCAACTCATACCAGACGATGAAGTGAAAATTCTACAGGCAATATCATCGAGGATAGGGAACTTGAACTGGAAGGTGACTTCACGTTCTTGCAGCGATGGAGGGTTCAAAAACAAGACTATTTTAGAGGACGACATCATAAGAAACGTAACATGCAATTGCACTTTCCAAAGTGGAGCCATTTGCCACGTTACACATATCCAACTGAAGGGTCTCAATTTATCTGGAGTTTTTCCTAGTGAGTTTGGTAATCTCACCCAACTGGTAGAACTTGATCTGACTCGAAACTATCTGAGTGGCTCTATCCCAAAGAGCTTTGGTGGACTCCCTCGGCTCGTCATTTTGTCCCTTATTGGTAACCGAATTAGTGGTCCAATTCCCAAGGAAATTGGTGATATTGCAAGTTTGGAGGAGCTGGTCTTGGAAGACAATCAGTTACAAGGAACTCTTCCTTCCAGTCTCGGAAAATTGAAGCAGTTACGCAGATTGCTTCTTTCTGCAAATAACTTCTCAGGGACAATACCAGAAACTTTTGGCAACCTAAAGAAACTAAAAGATTTTAGGTTAGATGGGAACACAATGTCAGGAAAAATACCCAGTTTTATTGGGAACTGGACCAAACTTGGAAGATTGGATCTGCAGGGCACATCCATGGAAGGCCCAATTCCTCCCACCATAGCCAAGTTAACAAATTTGACTGAATTGAGAATATCTGATCTGAATGGACCCACAATGAAATTTCCTAATCTGGAGAATTTGAAATCCTTGAAACATTTGGTGTTGAGAAATTGCTCAATTATTGGTTCCATTCCAGATAACATTGGTCAAATGGAAAGCTTAGTTACTCTAGATTTGAGTTTCAACAGGTTGACTGGTGGAATTCCAGATACAATAAAAGGCTTGGCAAAGCTTGATTACATGTTTTTGACTAACAATTCACTGAGTGGAGCAATCCCAGGATGGATACTGAGCAACAAACATAACTTGAACTTGGTTTCTAGCCTCTCATCTTCTGCGAACAGCTCAGTTACTTGCCTGAAAAAAGACCTTCCATGTGGAGGAAAACCCAAGTATCATTCATTGTTCATAAACTGTGGAGGACCAGAAATGGAAGATGATGAGAACAATAAATACGAGGCAGACCTCTCACGAGAGGGCATATCAAACTTCTTTTCTAGAGACAAATGGGCTTATAGCAGCACAGGAGTATATTTGGGAAATGCTAAAGCTGATTACATAGCAACAAACACATTTTCTCTGAACATTAGTGGTCCAAAGTACTACCAAACAGCTCGCCTTTCTCCCTTGTCACTCAAGTATCATGGCCTCTGTATGCTCAATGGAAACTATAAAGTGAAGCTCCACTTTGCTGAGATTATGTATTCTGATGACCAAACATTTAGCAGCCTTGGAAGGCGCATATTTGATGTGTCAATTAAAGGCAGGAAATATTTGAGTGATTTTAACATTGTGAAGGAAGCTGGTGGTGTTGGTAAGGGCATTGTGAGGGATTTTGATGTTGATGTTGATGATAACACTTTGGAGATCCATTTATACTGGGCAGGGAAAGGAACCACCGCCATTCCTGACAGAGGTGTATATGGACCTCTTATATCTGCTATTTCAGTGACCCCAAACTTTAAAATTCCTTCAAAAGGGCTTTCAGCTGGAGCCATTGCTGGAATTGTGGCTGGATCATGTGTGCTGCTCATACTGATACTGTTTGTCCTTCGAAAGATGGGTTTCCTTGGTGGGAAAGATCCAAAAGACAAAGAACTTCTTGATCTGAAAACGGGTTATTTCACTTTAAGACAAATCAAAGCTGCCACTGATAACTTTGACCCAGCAAATAAGATAGGTGAAGGAGGTTTTGGGCCAGTGTACAAGGGCATACTATCAGATGGTGCTGTTATAGCTGTCAAGCAGCTTTCCTCCAAATCAAAGCAAGGAAACCGTGAATTTGTTAATGAAATAGGAATGATATCTGCTTTGCAGCATCCTAACCTTGTGAAGCTTTATGGTTGCTGCATTGAAGGAAACCAGTTGCTGCTAATATATGAGTACATGGAGAACAATAGTCTTGCTCGTGCTCTTTTTGGTCGCCCAGAACAGAGGCTACACTTGGATTGGCCTACAAGAATGAAAATCTGTGTGGGGATAGCAAGGGGATTAGCTTATCTTCATGAAGAATCAAGATTGAAAATTGTACACAGGGATATTAAGGCAACAAATGTCTTACTTGATAAGGATTTGAATGCCAAGATCTCTGACTTTGGTTTAGCCAAGCTTGATGAAGAAGAGAATACTCATATTAGTACCAGAGTAGCAGGAACAATTGGTTATATAGCTCCTGAATATGCATTGCGAGGTTACTTGACTGACAAAGCAGATGTTTATAGCTTTGGAGTTGTTGCTTTGGAGATCGTCAGTGGAATAAGCAACACGAATTACAAGCCAAAGGAAGAATTTGTTTATCTTCTTGATTGGGCATATGTTCTCCAAGAGCAAGGAAACCTCCTTGAACTAGTGGATCCAAGTCTTGGTTCAAGCTACTCCTCAGAGGAAGCCATGAGAATGCTGGAGTTAGCACTCTTATGCACCAATCCATCTCCCACTCTCAGACCATCCATGTCATCTGTAGTTAGCATGCTTGAAGGAAAATCTCCTATCCAAGCACCGATAATCAAGCGTGGCCGGGAGGCCAGCCAGGATGCAAGATTCAAATTCTTTGAGATGCTTTCACAAGATAGCCAAACCCAAACCTTTGTTTCTTCTACATTCTCTCAAGAAAGTATAGAGCAAAAAGCCAAATCAATGGATGGTCCATGGGTTAACTCCTCCGTTTCTCTTACAAGTAAAGAGTTTTCTTCTTCATCCGGTAAGCTTCTTGGGGATTCAAATGATGTATGA 3000 0.412 MESAISSSKLFYVIVLWCFALNAFRDYGSNAQLIPDDEVKILQAISSRIGNLNWKVTSRSCSDGGFKNKTILEDDIIRNVTCNCTFQSGAICHVTHIQLKGLNLSGVFPSEFGNLTQLVELDLTRNYLSGSIPKSFGGLPRLVILSLIGNRISGPIPKEIGDIASLEELVLEDNQLQGTLPSSLGKLKQLRRLLLSANNFSGTIPETFGNLKKLKDFRLDGNTMSGKIPSFIGNWTKLGRLDLQGTSMEGPIPPTIAKLTNLTELRISDLNGPTMKFPNLENLKSLKHLVLRNCSIIGSIPDNIGQMESLVTLDLSFNRLTGGIPDTIKGLAKLDYMFLTNNSLSGAIPGWILSNKHNLNLVSSLSSSANSSVTCLKKDLPCGGKPKYHSLFINCGGPEMEDDENNKYEADLSREGISNFFSRDKWAYSSTGVYLGNAKADYIATNTFSLNISGPKYYQTARLSPLSLKYHGLCMLNGNYKVKLHFAEIMYSDDQTFSSLGRRIFDVSIKGRKYLSDFNIVKEAGGVGKGIVRDFDVDVDDNTLEIHLYWAGKGTTAIPDRGVYGPLISAISVTPNFKIPSKGLSAGAIAGIVAGSCVLLILILFVLRKMGFLGGKDPKDKELLDLKTGYFTLRQIKAATDNFDPANKIGEGGFGPVYKGILSDGAVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLIYEYMENNSLARALFGRPEQRLHLDWPTRMKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLDEEENTHISTRVAGTIGYIAPEYALRGYLTDKADVYSFGVVALEIVSGISNTNYKPKEEFVYLLDWAYVLQEQGNLLELVDPSLGSSYSSEEAMRMLELALLCTNPSPTLRPSMSSVVSMLEGKSPIQAPIIKRGREASQDARFKFFEMLSQDSQTQTFVSSTFSQESIEQKAKSMDGPWVNSSVSLTSKEFSSSSGKLLGDSNDV 999
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1292 999 Gene3D Phosphorylase Kinase; domain 1 615 718 - -
Dere07g1292 999 SMART serkin_6 643 912 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g1292 999 Pfam Malectin domain 391 571 IPR021720 -
Dere07g1292 999 Gene3D Ribonuclease Inhibitor 274 379 IPR032675 -
Dere07g1292 999 ProSitePatterns Serine/Threonine protein kinases active-site signature. 765 777 IPR008271 GO:0004672|GO:0006468
Dere07g1292 999 Pfam Leucine rich repeat 285 344 IPR001611 GO:0005515
Dere07g1292 999 Pfam Leucine rich repeat 93 152 IPR001611 GO:0005515
Dere07g1292 999 Pfam Leucine rich repeat 165 222 IPR001611 GO:0005515
Dere07g1292 999 ProSiteProfiles Protein kinase domain profile. 643 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g1292 999 FunFam Putative LRR receptor-like serine/threonine-protein kinase 719 926 - -
Dere07g1292 999 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 615 718 - -
Dere07g1292 999 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53440 38 203 - -
Dere07g1292 999 Gene3D Transferase(Phosphotransferase) domain 1 719 924 - -
Dere07g1292 999 SUPERFAMILY Protein kinase-like (PK-like) 627 915 IPR011009 -
Dere07g1292 999 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 278 370 - -
Dere07g1292 999 CDD STKc_IRAK 649 916 - -
Dere07g1292 999 Pfam Protein tyrosine and serine/threonine kinase 647 913 IPR001245 GO:0004672|GO:0006468
Dere07g1292 999 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 18 950 - -
Dere07g1292 999 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 204 271 - -
Dere07g1292 999 MobiDBLite consensus disorder prediction 980 999 - -
Dere07g1292 999 Gene3D - 389 576 - -
Dere07g1292 999 Gene3D Ribonuclease Inhibitor 43 166 IPR032675 -
Dere07g1292 999 Gene3D Ribonuclease Inhibitor 168 273 IPR032675 -
Dere07g1292 999 SUPERFAMILY L domain-like 84 361 - -
Dere07g1292 999 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 388 576 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1292 Dere-ChrDere07 16640874 16654042 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1292 5 986 Receptor kinase-like Gene Family AT1G53440 60.099 0.0 1205
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Dere07g1292 PK_Tyr_Ser-Thr 1.9e-48 CL0016