Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1255 ATGGCTTCCTCCTCCAAGGACCGTGATAACTTTGTCTACGTCGCCAAGCTATCTGAGCAAGCCGAGCGTTACAACGAAATGGTGGATGCCATGAAAAATGTGGCAAAGCTGGACGTTGAGTTGAGTGTGGAAGAGAGAAATTTATTCTCCGTTGGGTACAAAAATGTAGTTGGAGCCAGGAGAGCATCGTGGAGGATCTTGTCATCGATAGAGCAGAAAGAGGAATCGAAAGGGAATGAGTTGAATGCTAAGCGTATCAAGGATTACAGGCAAAAAGTCGAGTTGGAGCTTAACAACATTTGCAGTGACATCATGATTATACTAGATGAGCATCTTATACCATCCACTAATTTTGCAGAGTCCACTGTGTTCTATTATAAGATGAAAGGAGATTATTACCGATATTTGGCAGAGTTCAAAGCTAGTGATGAGAAGAAAGAGGTAGCAGATCAGTCACTCAAAGCATATCAGATGGCCTCTAGCACTGCTGAGACTGAGTTACCTCCTACACATCCCATCCGTTTGGGTCTGGCTCTAAATTTCTCGGTGTTTTATTATGAAATATTGAATTCACCTGAAAGGGCATGCCACCTTGCAAAGCAAGCCTTTGATGATGCTGTCTCAGAGCTGGATGCCCTGAGTGAGGAATCTTACAAGGATAGTACCTTGATCATGCAGCTGTTGAGAGACAACCTTACTTTGTGGACTTCTGATATCCCAGAAGATGGTGAAGACCATAAGATGGAAAGCACGGCTAGGAGTGGTACAGGGGAAAACGAGTGA 783 0.4393 MASSSKDRDNFVYVAKLSEQAERYNEMVDAMKNVAKLDVELSVEERNLFSVGYKNVVGARRASWRILSSIEQKEESKGNELNAKRIKDYRQKVELELNNICSDIMIILDEHLIPSTNFAESTVFYYKMKGDYYRYLAEFKASDEKKEVADQSLKAYQMASSTAETELPPTHPIRLGLALNFSVFYYEILNSPERACHLAKQAFDDAVSELDALSEESYKDSTLIMQLLRDNLTLWTSDIPEDGEDHKMESTARSGTGENE 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1255 260 PANTHER 14-3-3 PROTEIN 8 239 IPR000308 -
Dere07g1255 260 PRINTS 14-3-3 protein zeta signature 89 113 IPR000308 -
Dere07g1255 260 PRINTS 14-3-3 protein zeta signature 155 181 IPR000308 -
Dere07g1255 260 PRINTS 14-3-3 protein zeta signature 120 142 IPR000308 -
Dere07g1255 260 PRINTS 14-3-3 protein zeta signature 182 208 IPR000308 -
Dere07g1255 260 PRINTS 14-3-3 protein zeta signature 209 238 IPR000308 -
Dere07g1255 260 PRINTS 14-3-3 protein zeta signature 40 69 IPR000308 -
Dere07g1255 260 ProSitePatterns 14-3-3 proteins signature 2. 218 237 IPR023409 -
Dere07g1255 260 Gene3D - 1 250 IPR036815 -
Dere07g1255 260 PIRSF 14-3-3 2 248 IPR000308 -
Dere07g1255 260 FunFam 14-3-3 protein epsilon 3 249 - -
Dere07g1255 260 MobiDBLite consensus disorder prediction 238 260 - -
Dere07g1255 260 MobiDBLite consensus disorder prediction 239 253 - -
Dere07g1255 260 Coils Coil 14 34 - -
Dere07g1255 260 SMART 1433_4 8 249 IPR023410 -
Dere07g1255 260 Pfam 14-3-3 protein 15 236 IPR023410 -
Dere07g1255 260 SUPERFAMILY 14-3-3 protein 7 238 IPR036815 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1255 Dere-ChrDere07 16210686 16215315 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1255 3 257 14-3-3 family AT2G42590 75.097 1.25e-147 412