Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1254 ATGCATGATTCTACTTTGGCTAATGGGGCACTTTTTTCTACATTGGCCTCTATTGCAGCCTCAGCTATTCTTATACGAAGCATGGTTAATGACTTCGTCCCACATGAAGTTTTAAGCATTTTCTACTCGAAATTCCATAACATTTCCAGTCATTTTTCTTCCCAATTCACTCTTGTTATAGAAGAGTTTCAAGGGTTGTCCAGGAACCAAGTATTTGACGCTGCAGAGGCTTATCTTGGCACCATAGCTACCATCTCCGCTCAAAGACTTAAAACAGGAAAATCTGAGGATGATAAGGAGCTAGCTTTCAGTGTAGATAGAGATGCAGAAGTGTCTGATGTTTATGAAGATGTTCAAGTAAGGTGGAAAAATGTGTGCGTACAGGTTGAGCCATCTCATCGTAATATAGTTCCTTGGGATAAGATTGCCTCTGTACATTCTGAAGAAAGATCCTATGAGCTAACCTTTCACAAGAAACACAAGGAGAAGATCTTTAAAGCATATTTGCCATATGTCATGGAGAAAGCAAAGGCCTTGAAACAAGAACACAAGGCTGTGAAGATGCATACAGTGCAACATGATTTTTGGGAGGCATATGCTGTCAACTTTAGGAAGGAATTCTACAGAAGAACTGGGAAAGCCTGGAAACGAGGGTACCTGCTATATGGCCCTCCTGGTACTGGCAAGTCTAGCTTGATTGCAGCCATGGCCAATTATCTTAACTATGATATTTATGACTTAGATCTCACAGCTGTTCATAGCAATATGGATTTAAAGGCTTTGCTGCTTGCCATGTCCAACCGTTCCATACTTGTGCTGGAGGATATTGACTGCACCATAAATCTGCAGAACCGAGAAAAAGATGATAAACCAGTCAATAATGGTGACAACAAGGTTACACTTTCAGGACTCTTGAACGTCATAGATGGCCTTTGGTCGTGTTGTGGGGAGGAACGCATTATTGTTTTCACAACTAATCACAAAGACAGGCTTGATCCTGCTCTGCTAAGGCCTGGAAGGATGGACATGGAAATCCACATGTCATACTGCACCAGTTCTGTTTTTAGACAGTTGGCCTTCAACTACCTGGGAATTTCACAACACAACCTGTTTGCAGAAATTGAAGAGCTCATAGGAGAAGTTCAAGTCACTCCAGCAGAAATTGCAGGAGAGCTAACAAAGACTGCTTCTGCTGAAAATTCCCTGCCAGAGCTCACCAAGTTCCTGTGCAGGAAAAAGAAAGAACGTGAAGGTTGA 1257 0.42 MHDSTLANGALFSTLASIAASAILIRSMVNDFVPHEVLSIFYSKFHNISSHFSSQFTLVIEEFQGLSRNQVFDAAEAYLGTIATISAQRLKTGKSEDDKELAFSVDRDAEVSDVYEDVQVRWKNVCVQVEPSHRNIVPWDKIASVHSEERSYELTFHKKHKEKIFKAYLPYVMEKAKALKQEHKAVKMHTVQHDFWEAYAVNFRKEFYRRTGKAWKRGYLLYGPPGTGKSSLIAAMANYLNYDIYDLDLTAVHSNMDLKALLLAMSNRSILVLEDIDCTINLQNREKDDKPVNNGDNKVTLSGLLNVIDGLWSCCGEERIIVFTTNHKDRLDPALLRPGRMDMEIHMSYCTSSVFRQLAFNYLGISQHNLFAEIEELIGEVQVTPAEIAGELTKTASAENSLPELTKFLCRKKKEREG 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1254 418 CDD RecA-like_BCS1 205 347 - -
Dere07g1254 418 Gene3D - 183 344 IPR027417 -
Dere07g1254 418 PANTHER BCS1 AAA-TYPE ATPASE 204 414 - -
Dere07g1254 418 Pfam Domain associated at C-terminal with AAA 33 125 IPR025753 -
Dere07g1254 418 Gene3D - 345 415 - -
Dere07g1254 418 ProSitePatterns AAA-protein family signature. 319 337 IPR003960 GO:0005524|GO:0016887
Dere07g1254 418 SMART AAA_5 215 351 IPR003593 GO:0016887
Dere07g1254 418 Pfam ATPase family associated with various cellular activities (AAA) 220 348 IPR003959 GO:0005524|GO:0016887
Dere07g1254 418 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 104 392 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1254 Dere-ChrDere07 16207890 16210535 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1254 217 353 Calmodulin-binding Proteins AT3G56690 26.207 7.12e-11 62.4