Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1238 ATGATTAACAGTGGGGTGTGCAGTCTCCGTACGTGTTGCCTGCGTCTTCCTTACCTCCCCGAGAGACCTCTACTCCGGCCACCTCGCCTCTCATTTACTTGCCGCCGGCGGCGTCGGCTTCTGGTCACCTCGTCTGCAGTCGCCGAAGCTAATTATAAGACCAAAGAGAAGGTCATTGTGATATCTGGTCCCACTGGCGCTGGTAAAAGCCGGCTTGCATTGGAACTCGCGAAGCGGCTCAATGGCGAAATTGTCAGTGCCGATTCTGTCCAGGTGTACCAAGGTCTTGATGTTGGATCCGCAAAACCTTCCCCAAATGATAGGAAGGAGGTAATGCATCATCTGGTAGATATATTGCATCCATCTGAAGACTATTCAGTTGGACAATTTTTTGAGGATGCAAGGCAAGCTACAAGATGTATTCTTGACAATGGCCGCATTCCCATAGTTGTTGGGGGAACTGGATTGTATTTAAGATGGTTCATATATGGAAAGCCAGATGTCCCAAAAGCCTCTCCGGAGATCACATCTGAAGTATATTCAGAGTTAGCTGAACTGCAGAGAAATGAAGACTGGGATGCTGCTGTGCAGTTGATGGTTAATGCAGGTGACCCAAAGGCCCAAATTTTAGCAGTGAATGATTGGTATCGATTACGGCGTAGCCTAGAGATTATCAAGTCTAGTGGATCACCTCCATCTGCTTTTCGGGTGCCATATGATTCTTTCAGGGAACAGGGTGATTCTAATGTTGCTGATGGTTCTGAATCTTCTGATGTCAACATTTCTGGGGATTCAATTGAAGGAAACAAGTTCTCAGATTTGGACTACGAGTTTATTTGTTTTTTCCTTTCCAGTCAAAGACTTGACCTATATAGATCAATTGACTATCGTTGTGAAGATATGCTGTTGGGAAGGGATGGGATTCTCTCCGAGGCTCGATGGCTTCTAAAGATGGGTCTTCATCCAAACTCCAATTCAGCCACACGAGCAATCGGTTACAGACAAGCTATGGAATACTTACTCAGATGCAGACAGCATGGGGGCCAGAGTTCAGCTGGAGAATTTTACAAATTTTTATCTCAATTTCAAAAAGCATCTAGGAATTTTGCTAAAAGACAGTTGACATGGTTTCGCAATGAACGTATATACCATTGGCTTGATGCTTCTAGACCTTTGGACACAGTTATTAAATTCATTGACAAAGCATATCATGATTGGAGTGGAAGTCTCGTTGTGCCTGAACACCTTAGAATGTCAAGAGATTTATCTAGTCGCCGAGAAGCTACTCAACTTAAGTCTTACTGCACAAAAAATAGGCATTTCATGAACTGCGAAGATTGTTCACATATTCTGGACTGGATAAAGAAGACTGAAGGATGA 1380 0.4406 MINSGVCSLRTCCLRLPYLPERPLLRPPRLSFTCRRRRRLLVTSSAVAEANYKTKEKVIVISGPTGAGKSRLALELAKRLNGEIVSADSVQVYQGLDVGSAKPSPNDRKEVMHHLVDILHPSEDYSVGQFFEDARQATRCILDNGRIPIVVGGTGLYLRWFIYGKPDVPKASPEITSEVYSELAELQRNEDWDAAVQLMVNAGDPKAQILAVNDWYRLRRSLEIIKSSGSPPSAFRVPYDSFREQGDSNVADGSESSDVNISGDSIEGNKFSDLDYEFICFFLSSQRLDLYRSIDYRCEDMLLGRDGILSEARWLLKMGLHPNSNSATRAIGYRQAMEYLLRCRQHGGQSSAGEFYKFLSQFQKASRNFAKRQLTWFRNERIYHWLDASRPLDTVIKFIDKAYHDWSGSLVVPEHLRMSRDLSSRREATQLKSYCTKNRHFMNCEDCSHILDWIKKTEG 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1238 459 FunFam tRNA dimethylallyltransferase 9 166 237 - -
Dere07g1238 459 NCBIfam tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 58 235 IPR018022 GO:0008033
Dere07g1238 459 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 401 IPR027417 -
Dere07g1238 459 Gene3D - 55 448 IPR027417 -
Dere07g1238 459 Hamap tRNA dimethylallyltransferase [miaA]. 58 397 IPR018022 GO:0008033
Dere07g1238 459 Gene3D - 167 237 - -
Dere07g1238 459 Pfam IPP transferase 91 380 - -
Dere07g1238 459 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 58 185 IPR027417 -
Dere07g1238 459 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 55 389 IPR039657 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1238 Dere-ChrDere07 16006095 16017760 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1238 61 382 C2H2 Transcription Factor Family AT2G27760 24.242 1.15e-16 80.1