Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1233 ATGGCAGGGACTTTTGGGAGGGACAGCAGAAGAAGCAGGTCTCACAGTGGTGGCGGTTGCACGAGGAACGAGAGGAGACTGGGAAGAAGAATCAAAGCTCGGACTCTAAAGAATCCTCGCCATCATCAACAAAACCAGAAGCAGAAACCCACAAAATTCTTGAAAGCTGGAAGAGGAAAAGCACAAGGGTATGTAGGGGAAGAAGTAGGAGGAGAAGACGAAGAGGACCAGGATTCATCAATAGGAGTATCCCCATCTCACAAAGACCCAGCCTTCCATCTTCATCTTCAATATCTGCAACAAAACCACTCTTATGCAGCTTTAGATACAGAGCACGATCCCCTTCTTCACCCTCCAAAGAAACGCTCTTATTTCCTTCCTCCGCCTCCACCTTCTTCGTCTTCTACTTCCGTTGAATATGCAACAAAGATGGGAGAAAGCACCCATCATAATCAGCGAGCAGCAACGACGTCGTCTAGATTGGCCATGAGAGGTGGAGTGGGAGAGATCGTGGAGGTCCAAGGAGGCCACATTGTTCGCTCCACGGGACGCAAAGACCGTCACAGCAAGGTGTGTACAGCCAAGGGACCCAGAGATCGGCGAGTTCGTCTCTCCGCCCACACAGCCATTCAATTCTACGACGTGCAAGACCGTCTCGGCTACGACCGGCCCAGCAAAGCTGTCGATTGGCTCATCAAGAATGCCAAAGCCGCCATAGATGAGCTCGCAGAGCTTCCCGCTTGGAACCCCAATACAGTGAACCCAAATGCCCAGCAAGAGCAAGAGCAAGAACAGAATCACCGGATGAACGAGAACGAAAACAAAAACGAGAATCCCATCGGCGTTCACCGTGCGGCGGTGGATGCTATGGCTTCCGGTAGCCGCAGGACAAGTACGCCGGCGGGAAGCGGCCGTAGGATTTTGGAGCAATTGGGTGAAAACCTGAACGGTGGTGGGTCGGGTTTTCTGCCGCTGACGTTGGACACCGACATTGCTGACACCATCAAGTCTTTCTTCCCGATGGGTGCTACGGCGCCGGAGGCGGATTCGTCCTCGATTCAGTTTCAGAATTACCCACCAGATTTGCTTTCGCGAACTAGTAGCACCAGCCAGAACCAAGATCTACAGCTCTCGCTCCACTCATTCCAGGACCCGATTCTGCTTCACCAAGCTCAAGCTCAGACCCAACACCACCATCAACATCACCACCCCCACCAGAACGAGCATTTATTCTCTGCAATAACCCCACTGGGGTTCGATGGGGCTTCTTTCCCAGAGGAACAAGGTCGATTGCATAGAATGGTAGCTTGGCATGCTGGTGCTGCTGATACTGGTAATAATGGCCACGGCAGCGGAGGAGGAGGATTTATCTTCAACTCACCGTCGCCGATGCCGACTCCGCTGCCGCCACAGTTCGGCCTGAGCCAGTATCTTTCTCAGAGGGGACCCCTTCAGTCCAGTTACACCCCTTCGATTCGTGCTTGGATAGACCCATCACTCGCCACCACAACTGATCATCACCACCACTATCTTCCACCGACAATCCACCATCAATCTTCTTTCTCCGGCGGCGTCGGATTTGACTCCGGTGGTTTCTCCGGTTTCCGCATACCAGCACGAATCCAGGGTGAAGAGGAGCACGACGGCGTTTCTGACAAGCCGTCCTCTGCTTCCTCTGATTCTCGCCATTGA 1692 0.5313 MAGTFGRDSRRSRSHSGGGCTRNERRLGRRIKARTLKNPRHHQQNQKQKPTKFLKAGRGKAQGYVGEEVGGEDEEDQDSSIGVSPSHKDPAFHLHLQYLQQNHSYAALDTEHDPLLHPPKKRSYFLPPPPPSSSSTSVEYATKMGESTHHNQRAATTSSRLAMRGGVGEIVEVQGGHIVRSTGRKDRHSKVCTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKNAKAAIDELAELPAWNPNTVNPNAQQEQEQEQNHRMNENENKNENPIGVHRAAVDAMASGSRRTSTPAGSGRRILEQLGENLNGGGSGFLPLTLDTDIADTIKSFFPMGATAPEADSSSIQFQNYPPDLLSRTSSTSQNQDLQLSLHSFQDPILLHQAQAQTQHHHQHHHPHQNEHLFSAITPLGFDGASFPEEQGRLHRMVAWHAGAADTGNNGHGSGGGGFIFNSPSPMPTPLPPQFGLSQYLSQRGPLQSSYTPSIRAWIDPSLATTTDHHHHYLPPTIHHQSSFSGGVGFDSGGFSGFRIPARIQGEEEHDGVSDKPSSASSDSRH 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1233 563 MobiDBLite consensus disorder prediction 248 279 - -
Dere07g1233 563 MobiDBLite consensus disorder prediction 27 48 - -
Dere07g1233 563 Pfam TCP family transcription factor 183 276 IPR017887 -
Dere07g1233 563 ProSiteProfiles TCP domain profile. 184 242 IPR017887 -
Dere07g1233 563 MobiDBLite consensus disorder prediction 8 26 - -
Dere07g1233 563 MobiDBLite consensus disorder prediction 264 278 - -
Dere07g1233 563 MobiDBLite consensus disorder prediction 445 475 - -
Dere07g1233 563 MobiDBLite consensus disorder prediction 111 139 - -
Dere07g1233 563 MobiDBLite consensus disorder prediction 249 263 - -
Dere07g1233 563 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 134 485 IPR005333 GO:0003700
Dere07g1233 563 MobiDBLite consensus disorder prediction 540 563 - -
Dere07g1233 563 MobiDBLite consensus disorder prediction 1 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1233 Dere-ChrDere07 15887362 15889138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1233 162 563 TCP Transcription Factor Family AT3G15030 49.438 1.20e-102 314
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Dere07g1233 TCP 9e-33 No_clan