Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1223 ATGGGTAGGCCACCAAGTAACGGAGGCCCAGCCTTTCGCTTCACTCAGGCTGAGGTTGCAGAAATGGAAGCAATTTTGCAAGAGCACAATAATGCTATGCCAGCACGAGATGTTCTTACAGCTCTTGCAGAGAAGTTCAGTGAATCTCCTGATCGTAAAGGCAAGATTACTGTGCAGATGAAGCAAGTTTGGAATTGGTTTCAAAATAAGCGGTATGCTATAAGGGCAAAATCAAGTAAGGCTCCTGGAAAGTTAAGTATTACTCCTATGCCTCGAGATGATTCAACCCCAGTTAGAAATATGCCTCAACCAGTGGCCACTCCCATACCTCCTGCTGCAGTTCCAACGGCAGGGAAAGGTACTCCAGAAAATTCGGCAATGGAGTTTGAAGCTAAGTCAGGAAGGGATGGAGCATGGTACGATGTCGCAAACTTTCTGTCCCACAGACATTTGGAAACCAGTGATCCGGAAGTGCTAGTTAGATTTGCTGGTTTTGGACCTGAGGAAGATGAGTGGGTTAATGTCCGAAGGAATGTCCGGCCACGCTCTCTGCCATGTGAATCATCAGAATGTGTAGCTGTGCTTCCTGGAGATCTCATACTCTGTTTTCAGGAAGGTAAAGAGCAGGCTCTTTACTTCGATGCTCATGTCCTTGATGCTCAAAGACGGAGGCATGATGTGAGGGGTTGTCGTTGTAGATTTTTGGTTCGTTATGATCATGATCAATCTGAGGAAATTGTTCCGCTTAGGAAGGTTTGTCGTAGGCCCGAAACTGATTACAGGTTACAACAACTTCATGCTATGAATGAAGCAGCACCTGTGGATCAGCAGAAGACTGGCATGGACTCAATGGCTGTTCATCCTATCAGGGTTACAAGCTCAGCTGAAACAGTGCCAAAGCAGCAGAGTGCAAACATTGCCATCGTACCACCACCAGTTTCACAAGCAAATGTTTCCTTAGCCCCACAAACTATGAATGTTGATCCAATAAAGTCTGAAGCAGCCAGTGATATGAAAGGAGGAAACACCATTGTTCGCCCTGGTGGTTCTGCATTCACGAGCAACGTAATTACAAGCAATGTTCCAGTAGTTTCTAGTCAGAACATGGCTGAAGGAAAATGA 1122 0.4581 MGRPPSNGGPAFRFTQAEVAEMEAILQEHNNAMPARDVLTALAEKFSESPDRKGKITVQMKQVWNWFQNKRYAIRAKSSKAPGKLSITPMPRDDSTPVRNMPQPVATPIPPAAVPTAGKGTPENSAMEFEAKSGRDGAWYDVANFLSHRHLETSDPEVLVRFAGFGPEEDEWVNVRRNVRPRSLPCESSECVAVLPGDLILCFQEGKEQALYFDAHVLDAQRRRHDVRGCRCRFLVRYDHDQSEEIVPLRKVCRRPETDYRLQQLHAMNEAAPVDQQKTGMDSMAVHPIRVTSSAETVPKQQSANIAIVPPPVSQANVSLAPQTMNVDPIKSEAASDMKGGNTIVRPGGSAFTSNVITSNVPVVSSQNMAEGK 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1223 373 Gene3D - 10 84 - -
Dere07g1223 373 Pfam SAWADEE domain 126 253 IPR032001 GO:0003682
Dere07g1223 373 Gene3D - 186 258 - -
Dere07g1223 373 ProSiteProfiles 'Homeobox' domain profile. 13 77 IPR001356 GO:0003677
Dere07g1223 373 SMART HOX_1 7 81 IPR001356 GO:0003677
Dere07g1223 373 CDD homeodomain 13 75 IPR001356 GO:0003677
Dere07g1223 373 SUPERFAMILY Homeodomain-like 4 77 IPR009057 -
Dere07g1223 373 Gene3D - 124 185 - -
Dere07g1223 373 PANTHER PROTEIN SAWADEE HOMEODOMAIN HOMOLOG 2 1 320 IPR039276 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1223 Dere-ChrDere07 15692169 15700266 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Dere07g1223 SAWADEE 4.4e-40 CL0049