Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1211 ATGCATCGAACTCCCATTCGGTTTCCTCAGACATTGTCTCTTTCTTCCTTTGAAACGAACACTCTCTCACTTTGTTTTCCTTTGAAGGTTATTTCTTCAAGCCTTAAAATGGCTCCCAGAGACAGACCCACCCCTCTCGCCGGATCAAACCCGACCCACTCTGCCAAAGAGATCCGATACAGAGGCGTACGGAAGAGACCCTGGGGGCGCTACGCAGCTGAGATTCGTGATCCGGGGAAAAAAACCCGCGTATGGCTAGGCACTTTTGACACGGATGAGGAGGCGGCGCGTGCGTACGACACGGCCGCGAGGGAGTTCCGCGGCGCGAAGGCTAAGACCAATTTTCCGACTCCGTCTGAGCTCACGAACAACTCGAGTCGTAGCCCCAGCCAGAGTAGCACGCTCGAGTCGTCATCGCCGCCGCCACAGGCACCTCCGCCGCTTGAACTCTCCCTGGCGACTGTTTCTCCCGGCGGCGCGTTGGGCTTCCCGGTGATTCCGGTGGCTCGCCCGGTCATGTTTTTTGACGCGTTTGCTCGGGCGGAGAATCTGAGGGCAGCTGCTCGCAGTCGCGAGATGTGCGGGTTTGATCGGCCTGTGGTGGAGTTCCGCGGCGCTGGTGGTGCTCAGAGTGACTCTGATTCGTCCTCGGTCGTTGATTATGAGCGCGCTCCGCCTCGAACACTCTTGGATCTTGACCTCAACGTTCCTCCTCCGCCGGAGGTTGCCTGA 732 0.5861 MHRTPIRFPQTLSLSSFETNTLSLCFPLKVISSSLKMAPRDRPTPLAGSNPTHSAKEIRYRGVRKRPWGRYAAEIRDPGKKTRVWLGTFDTDEEAARAYDTAAREFRGAKAKTNFPTPSELTNNSSRSPSQSSTLESSSPPPQAPPPLELSLATVSPGGALGFPVIPVARPVMFFDAFARAENLRAAARSREMCGFDRPVVEFRGAGGAQSDSDSSSVVDYERAPPRTLLDLDLNVPPPPEVA 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1211 243 MobiDBLite consensus disorder prediction 109 151 - -
Dere07g1211 243 MobiDBLite consensus disorder prediction 204 223 - -
Dere07g1211 243 CDD AP2 59 116 IPR001471 GO:0003700|GO:0006355
Dere07g1211 243 MobiDBLite consensus disorder prediction 115 138 - -
Dere07g1211 243 FunFam Ethylene-responsive transcription factor 2 59 117 - -
Dere07g1211 243 SMART rav1_2 59 122 IPR001471 GO:0003700|GO:0006355
Dere07g1211 243 Gene3D AP2/ERF domain 58 117 IPR036955 GO:0003700|GO:0006355
Dere07g1211 243 ProSiteProfiles AP2/ERF domain profile. 59 116 IPR001471 GO:0003700|GO:0006355
Dere07g1211 243 PRINTS Ethylene responsive element binding protein signature 82 98 IPR001471 GO:0003700|GO:0006355
Dere07g1211 243 PRINTS Ethylene responsive element binding protein signature 60 71 IPR001471 GO:0003700|GO:0006355
Dere07g1211 243 SUPERFAMILY DNA-binding domain 59 117 IPR016177 GO:0003677
Dere07g1211 243 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 47 219 - -
Dere07g1211 243 Pfam AP2 domain 59 108 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1211 Dere-ChrDere07 15512812 15513543 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1211 42 176 AP2-EREBP Transcription Factor Family AT3G15210 64.000 7.59e-52 166
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Dere07g1211 AP2 5.8e-15 CL0081