Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1205 ATGGGTGAGTTGGAATCTCTATTGCCCAATCTTATTCCACAAAAACGTACGAATATGATAAATGTTTACGGCACTGCCACAATCTCACAGACCCGAACTGAAAAAATAACTTCAGTTGCGGCAGAAATGGGGTGCAATGCTTTTCTTGTGCACAATTATCGACTGTTTGAGGCTTTTAAGGAGTTGCTAGTAAGAATGGCTGATGCAGCAGGTCTAGCTGAGGCTGCAGGGTCAAGATTTAGTTCCTTGGAGCTAATTGGACAAGGGTCATTTGGTGATGTCTATAAAGCGTTTGACAAGGAGCTCAACAAACAAGTTGCTATTAAAGTGATTGATTTGGAAGAATCAGAGGATGAGATTGATGACATTCAGAAGGAAATTTCTGTTCTATCACAATGTCGATGCCCATACATTACTGAATATTATGGCTCCTATCTCCATCAAACTAAACTTTGGATAATAATGGAGTACATGGCCGGAGGCTCTGTTGCTGATCTACTCCAATCAGGTCCTCCCCTTGATGAAGTGTCAATTGGTTGCATTTTACGTGATTTGCTGTATGCTATTGATTACCTACACGCCGAAGGAAAAATTCATAGAGACATCAAAGCGGCAAACGTTTTGTTGTCTGAGAATGGTGATGTAAAGGTTGCAGATTTTGGCGTTTCTGCACAACTAACTAGGACCATATCAAGGAGAAAGACATTTGTAGGAACACCATTCTGGATGGCACCAGAAGTTATTCAGAATTCGGAAGGATATAATGAGAAGGCAGATATCTGGTCTCTGGGGATCACAGCAATTGAGATGGCAAAAGGGGAGCCTCCCCTTAGTGACCTTCACCCTATGAGAGTGCTTTTTATCATACCCCGTGAGACCCCACCACAGCTAGATGAACATTTTTCTCGCCCCATTAAAGAATTTGTTTCATTATGTTTAAAGAAGCTTCCAGCTGAGAGGCCAAGTGCTAAGGAACTTCTCAAACATCGATTTATTCGAACTGCTAGGAAGAGTCCAAAGCTTTTGGAAAGAATAAGGGAGCGTCCCAAGTATCAAATAAGGGAAGATGGGGAGACATCTAGAAATGGTCTAAGAGGGATAGGGGAGCCATCAGATACAGTGAAGGTGGCAAGAGATTCAGGAGGTGAAGAAGCTTCTCAAATCAATCCCAGTCAGGATAAAATTCTGAAGAATGATGGATGGGACTTCAGCATTGATGGATCACAGGGTACTGGAACTTTTCGTAGTGTTGGACTTGCACGACCACCTCAGTTCAGAGATAAGAAAACGGATGTTTCACATAGTCAGCTTGACCAGAAAAAGGCATCACAGAGTGGCCATCAAGGAGCATCTTCCTACAGAAGTATTCTTAGTGAATCACCAGAAACTTCCATTGAAGATGATGAATTGTCTGGGAATGGATCAGGAACTGTTGTTATTCGATCTCCAAAAGGATCACAACAGTCACTATTTCACGACCAAAGCTCCCAGTCTAGCAGCAACTATGCTTCCTTTGAACATGCTTCTACCAGTGGAACTATTGTTGTCCGTAGTCAGCATGATGATGATGACTCTTCGCAGACACTGAGGTCCAGGCTGGTACTTAATGAAAGAACTGCAAATGCCTCTGTCGAAGATAGTGCCACAAATCTTGCTGAGGCAAAGGCTGCTATCCAAAGACCAAGAAAAGGGAATACTCGAGAGAGAGTTGCACAGGGAAAGTCCAGCAATGGCGTGCAGGAAAGCAGGAGAGACCAAGTGACAAACGGCTTTGATTCCTCCAGACCATCTCGTGAGTACAATGGTCCACAGCAGGAAATTTCAGGATTGCACCATGCTGATGATGATCAAGTCAATGTTGAAATATCGTCATCCTCTGTGGCATTATCTGTTTTACTAATTCCTTCTCTAAAAGAGGCCTTTGCTGATGATCCAGAAGGGTCTTTTGTACAAGAAATGATCAATTCACTTATATACATGGAGCGCATAAAGCCTGGATCCTGTGATGCTCTTGTCAAAGAGTTGCTTCAGCGATTGGCAAGTTCAAAGGAATCTTCACTGAGGGATCTGCAGGAGCTGGCAGCTCAATTATTCACCAAGACCAAATCAGCTTCTGAAGAAATTCGAAATGCGAGTGCAGAAGCTGATACAAGGAAGAAACAGCAGAACAAGGAACTTCATTCAAATAGCAATCTAGGCCCTCTTGCAAGATTTCTTCTCTCAAGATGGCAAGGCCAAGCCTGA 2244 0.4309 MGELESLLPNLIPQKRTNMINVYGTATISQTRTEKITSVAAEMGCNAFLVHNYRLFEAFKELLVRMADAAGLAEAAGSRFSSLELIGQGSFGDVYKAFDKELNKQVAIKVIDLEESEDEIDDIQKEISVLSQCRCPYITEYYGSYLHQTKLWIIMEYMAGGSVADLLQSGPPLDEVSIGCILRDLLYAIDYLHAEGKIHRDIKAANVLLSENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSEGYNEKADIWSLGITAIEMAKGEPPLSDLHPMRVLFIIPRETPPQLDEHFSRPIKEFVSLCLKKLPAERPSAKELLKHRFIRTARKSPKLLERIRERPKYQIREDGETSRNGLRGIGEPSDTVKVARDSGGEEASQINPSQDKILKNDGWDFSIDGSQGTGTFRSVGLARPPQFRDKKTDVSHSQLDQKKASQSGHQGASSYRSILSESPETSIEDDELSGNGSGTVVIRSPKGSQQSLFHDQSSQSSSNYASFEHASTSGTIVVRSQHDDDDSSQTLRSRLVLNERTANASVEDSATNLAEAKAAIQRPRKGNTRERVAQGKSSNGVQESRRDQVTNGFDSSRPSREYNGPQQEISGLHHADDDQVNVEISSSSVALSVLLIPSLKEAFADDPEGSFVQEMINSLIYMERIKPGSCDALVKELLQRLASSKESSLRDLQELAAQLFTKTKSASEEIRNASAEADTRKKQQNKELHSNSNLGPLARFLLSRWQGQA 747
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1205 747 Coils Coil 676 696 - -
Dere07g1205 747 MobiDBLite consensus disorder prediction 467 505 - -
Dere07g1205 747 ProSiteProfiles Protein kinase domain profile. 80 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g1205 747 ProSitePatterns Protein kinases ATP-binding region signature. 86 109 IPR017441 GO:0005524
Dere07g1205 747 Coils Coil 106 133 - -
Dere07g1205 747 SMART serkin_6 80 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g1205 747 CDD STKc_MST3_like 78 352 - -
Dere07g1205 747 Gene3D Transferase(Phosphotransferase) domain 1 77 363 - -
Dere07g1205 747 MobiDBLite consensus disorder prediction 707 725 - -
Dere07g1205 747 FunFam serine/threonine-protein kinase dst1 isoform X1 77 365 - -
Dere07g1205 747 SUPERFAMILY Protein kinase-like (PK-like) 77 363 IPR011009 -
Dere07g1205 747 MobiDBLite consensus disorder prediction 422 436 - -
Dere07g1205 747 MobiDBLite consensus disorder prediction 343 362 - -
Dere07g1205 747 MobiDBLite consensus disorder prediction 556 604 - -
Dere07g1205 747 Pfam Protein kinase domain 81 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g1205 747 MobiDBLite consensus disorder prediction 703 730 - -
Dere07g1205 747 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 74 700 - -
Dere07g1205 747 MobiDBLite consensus disorder prediction 437 460 - -
Dere07g1205 747 MobiDBLite consensus disorder prediction 570 604 - -
Dere07g1205 747 MobiDBLite consensus disorder prediction 343 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1205 Dere-ChrDere07 15471723 15483657 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1205 66 747 MAP Kinase Kinase Kinase Kinase AT3G15220 62.304 0.0 821
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Dere07g1205 Pkinase 4.9e-67 CL0016