Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1202 ATGGAAGCAAAGAGTATTGAGAGGAAGAGAACTTCAGTTGAGAAGGTAAGGAAGGATAACATCATAGTTGAAGAAGATGTAGATGATGAGGTAGAAGAGGAGGATGAAAGTGGCGATGGCGGCGTTGGCGAAGAGAAGAGGAAAGGGGTTGTGGGGAGTGGAAGAAGAGGGTCCAGTGGAAGTGGTGGAGTTTCTCCACCTTCTTGTCAGGCAGAGAGGTGTGGGGCTGATCTGACCAATGCAAAGCGGTACCATCGCCGCCATAAGGTGTGCGAGTTCCACTCCAAGGCACCAGCTGTGATGGTTGCAGGGCTGAGACAGAGGTTTTGTCAGCAATGTAGCAGATTCCATGACTTGGGGGAATTTGATGAAGCTAAGAGAAGCTGCCGGAGGCGCTTGGCTGGGCACAATGAACGTCGCCGGAAAAGCACTGGTGAAATTTACAATGACAGCTGTAGCCGTGGCAAAGGCCATCCCACAAAGGAAAGCCATTGTAGGCATGCTGATGACAGAGGAAGAGTTCAAATGAGCGTTTCTGGGAGTTCTGGTTTCAAATCTTTCCACATCAGATGA 573 0.4991 MEAKSIERKRTSVEKVRKDNIIVEEDVDDEVEEEDESGDGGVGEEKRKGVVGSGRRGSSGSGGVSPPSCQAERCGADLTNAKRYHRRHKVCEFHSKAPAVMVAGLRQRFCQQCSRFHDLGEFDEAKRSCRRRLAGHNERRRKSTGEIYNDSCSRGKGHPTKESHCRHADDRGRVQMSVSGSSGFKSFHIR 190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1202 190 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 45 162 IPR044817 GO:0003677
Dere07g1202 190 Gene3D - 59 130 IPR036893 GO:0003677|GO:0005634
Dere07g1202 190 ProSiteProfiles Zinc finger SBP-type profile. 66 143 IPR004333 GO:0003677
Dere07g1202 190 MobiDBLite consensus disorder prediction 155 173 - -
Dere07g1202 190 MobiDBLite consensus disorder prediction 25 39 - -
Dere07g1202 190 SUPERFAMILY SBT domain 67 147 IPR036893 GO:0003677|GO:0005634
Dere07g1202 190 Pfam SBP domain 69 142 IPR004333 GO:0003677
Dere07g1202 190 MobiDBLite consensus disorder prediction 134 190 - -
Dere07g1202 190 MobiDBLite consensus disorder prediction 1 24 - -
Dere07g1202 190 MobiDBLite consensus disorder prediction 1 72 - -
Dere07g1202 190 FunFam Squamosa promoter-binding-like protein 14 60 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1202 Dere-ChrDere07 15424151 15425243 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1202 54 146 SBP-box Gene Family AT1G53160 73.118 5.98e-42 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Dere07g1202 SBP 9.7e-32 No_clan