Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1201 ATGGTGGTGCTGAGATATTTCTTAATGACTTTTCTCCAATTGGGGTTCTTGACCTGCTTTCTTTGCTTATCTCTGGGTCTAAAACCCCCAGCGCCATCTTGTGACTCCCATGATCTGTTGGCCCTGAAGGAATTTGCTGGCAGCCTCACAAATGGGTCTCTCAGCACATTGTGGTCCGATGATATTGCTTGCTGCAAATGGGTTGGAGTTTTCTGTGATAATGTGACTGCTGGGACGGCTGCTAGTAGGGTGATCAAGTTGATTCTGCCTCAAATGGGTCTCAAAGGGGTAATTTCGAATTCTCTAGCACAATTGGATCACTTAATTGTGCTGGATCTCTCATTCAATCATCTCCAAGGTCGGTTGCCTGCAGAATTCTCCAAGTTGAAGCTGTTGAAATTTCTTGATTTGAGCCATAATATGCTGTCAGGACCTGTTGCTGAAGCGCTTTCTGGTTTGCAATCCATTCAGACAGTTAATATTTCCAGTAATTCATTTGTTGGAAACCTCTCTCAGCTTGGGGAATTCCCTAATCTCCTTGCATTCAACATAAGCAACAACTCATTCAACGGCCAGTTCAATTCTCAAATTTGCAGTTCCTCTATGGGGTTTCATGTGCTTGATATATCTGCAAATCGCTTCGCTGGTGGTCTTGAAGGCTTGGACAAGTGTAACACGTCTCTCCAAGAGCTGCATTTGGATTACAATTTATTTTCAGGCCCTCTTCCAGATACCTTGTACTCATTGTCAGCCTTGGAGCAACTCTCAGCGTCTGTGAACAATTTCTCTGGCCAGTTAAGCAAGAAGCTAAGTAAGCTCTCTAGCCTTAAGTCTTTAATAATTTCTGGGAACCAATTTTCTGGGGAGCTTCCTAATGTGTTCGGGAATCTGTCACATTTAGAACAATTAGCAGCACAGTCCAATTCATTTTCTGGGCCATTGCCTTCTACCCTGGCTTTATGCCCAAAGCTTCGGGTGCTTGATCTTCGAAATAACTCTCTGGCTGGTCCAATCGATCTCAATTTCACAAAGTTGCCTAATTTGTGTACACTTGATCTTGCCACTAATCACTTTACTGGCCCCCTTCCAAGCTCCTTGTCTTATTGCCGTGAATTGAAAGTTTTGAGCCTCGCTAAGAATGGATTGACTGGCTCAACCCCCGAGAAGTATGCAAACCTTTCTTCACTTTTGTTTGTGTCTTTGTCAAACAACAGCTTAGAGAACTTATCTGGGGCGCTGTCAGTGCTGCAGCGTTGCAAAAATCTCACCACTCTTATCCTCACGAAGAATTTCCATGGTGAGGAAATACCAGAAAGTGTTATAGGTTTTGAGAACCTTATGGTTTTAGCACTTGGAAATTGTGGCCTCAAAGGCGAAGTCCCTGCTTGGCTATTAAATTGCAGCAAATTGGCAGTCCTCGATTTGTCTTGGAACCATTTGGGAGGTAGTATCCCTTCCTGGATTGGTAGGATGGACAATTTGTTCTACTTGGATTTCTCAAACAATTCTTTCGTGGGAGAAATACCAAAAAGTTTGGCACAATTGAGGGGCCTTTTATCCACAAATTGCAGTAGGCCAACTCTGTCTGCATCTGCTGGCATTCCTCTCTATGTTAAGAGAAACAAGAGTGCTAGTGGGCTGCAATATAACCAAGCCTCAAGTTTCCCTCCTTCAATATACTTGAGCAATAACAGATTAAGTGGAATAATATGGACTGAAATTGGGCAACTCAAAGCACTGCATGTCTTGGATTTAAGCCGGAATAACATCTCTGGTACCATTCCTAGCTCTATTTCTGAGATGGAGAACTTGGAAATATTAGATCTGTCATATAATGATCTCTATGGAATGATCCCCCAATCATTTAACAACCTCACATTCTTGTCAAAGTTCAGTGTTGCTTATAATCACTTGCAGGGACCAATTCCTACGGGGGGACAGTTTTTAAGCTTTTCTAGTTCAAGCTTTGAGGGCAACCCAGGACTTTGTGGGGAAATAGATTCTCCTTGCAAGATCACCAACAATATGGGATGGAGGCCCAATATTACTTCTGGTTCTTCCAGCAAATTTGGTAGAAACAACGTTCTTGGTATAACAATTAGTATAGGTGTAGGGCTTGCACTGCTGCTTGCTATTGTTCTGCTAAAGATATCAAAGAGGGATGAAGAGAAGCCAGTTGAGAACTTTGATGAGGAAGTGGGCAGGCCACACAGGTTATCTGAAGCACTTGTTTCTTCAAAATTGGTGCTTTTTCAGAATTCAGATTGCAAGGATCTCACTGTTGCAGATTTGTTAAAATCCACAAACAATTTTAACCAGGCAAACATTATTGGTTGTGGTGGGTTTGGTCTTGTCTACAAGGCAAATCTTCCAAATGGCACAAAAGCTGCGATCAAGAGACTTTCTGGGGACTGCGGTCAGATGGAGCGGGAATTCCAAGCTGAAGTGGAGGCCCTTTCAAGAGCTCAGCACAAGAATCTTGTTTCTCTTAAAGGTTATTGCCGGCATGGCAACGACAGATTGTTAATATACTCCTACTTGGAAAATGGAAGTTTGGATTATTGGCTGCATGAATGTGTGGATGCAAATTCAGCTCTGAAATGGGATGTGAGACTCAAGATCGCAAAGGGCGCAGCTCATGGATTAGCTTACTTGCACAAGGGGTGTGAGCCGTTCATAGTTCATCGAGATGTTAAATCTAGCAACATACTTCTGGATGATAAGTTTGAAGCTCATTTGGCTGATTTTGGCCTCGCAAGGCTACTTCAGCCTTATGACACCCATGTTACAACAGATTTGGTAGGTACTTTAGGATACATTCCTCCAGAATATAGTCAGACATTAACAGCAACCTTCAGGGGTGATGTCTATAGCTTTGGTGTTGTTCTTCTTGAGCTTCTTACTGCTAGAAGGCCCGTGGAAGTCATCAAGGGGAAAAACTGCAGGAACCTGGTGTCTTGGGTGTTTCAGATGAAATCTGAAAACAGGGAGCAAGAAATTTTCGATTCGGCCATTTGGGAGAAGGATCATGAGAAGCAGCTCTTGGAGGTACTGGCCATTGCCTGTAGATGTCTAGACCAGGATCCAAGGCAAAGACCCTCTATTGAAGAAGTTGTCTCGTCCCTTGATCGTGTAGTGGTTGATGGTTTTCAACAATGA 3159 0.4315 MVVLRYFLMTFLQLGFLTCFLCLSLGLKPPAPSCDSHDLLALKEFAGSLTNGSLSTLWSDDIACCKWVGVFCDNVTAGTAASRVIKLILPQMGLKGVISNSLAQLDHLIVLDLSFNHLQGRLPAEFSKLKLLKFLDLSHNMLSGPVAEALSGLQSIQTVNISSNSFVGNLSQLGEFPNLLAFNISNNSFNGQFNSQICSSSMGFHVLDISANRFAGGLEGLDKCNTSLQELHLDYNLFSGPLPDTLYSLSALEQLSASVNNFSGQLSKKLSKLSSLKSLIISGNQFSGELPNVFGNLSHLEQLAAQSNSFSGPLPSTLALCPKLRVLDLRNNSLAGPIDLNFTKLPNLCTLDLATNHFTGPLPSSLSYCRELKVLSLAKNGLTGSTPEKYANLSSLLFVSLSNNSLENLSGALSVLQRCKNLTTLILTKNFHGEEIPESVIGFENLMVLALGNCGLKGEVPAWLLNCSKLAVLDLSWNHLGGSIPSWIGRMDNLFYLDFSNNSFVGEIPKSLAQLRGLLSTNCSRPTLSASAGIPLYVKRNKSASGLQYNQASSFPPSIYLSNNRLSGIIWTEIGQLKALHVLDLSRNNISGTIPSSISEMENLEILDLSYNDLYGMIPQSFNNLTFLSKFSVAYNHLQGPIPTGGQFLSFSSSSFEGNPGLCGEIDSPCKITNNMGWRPNITSGSSSKFGRNNVLGITISIGVGLALLLAIVLLKISKRDEEKPVENFDEEVGRPHRLSEALVSSKLVLFQNSDCKDLTVADLLKSTNNFNQANIIGCGGFGLVYKANLPNGTKAAIKRLSGDCGQMEREFQAEVEALSRAQHKNLVSLKGYCRHGNDRLLIYSYLENGSLDYWLHECVDANSALKWDVRLKIAKGAAHGLAYLHKGCEPFIVHRDVKSSNILLDDKFEAHLADFGLARLLQPYDTHVTTDLVGTLGYIPPEYSQTLTATFRGDVYSFGVVLLELLTARRPVEVIKGKNCRNLVSWVFQMKSENREQEIFDSAIWEKDHEKQLLEVLAIACRCLDQDPRQRPSIEEVVSSLDRVVVDGFQQ 1052
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1201 1052 Gene3D Phosphorylase Kinase; domain 1 736 846 - -
Dere07g1201 1052 SUPERFAMILY Protein kinase-like (PK-like) 753 1042 IPR011009 -
Dere07g1201 1052 ProSitePatterns Protein kinases ATP-binding region signature. 777 799 IPR017441 GO:0005524
Dere07g1201 1052 Pfam Protein kinase domain 772 1040 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g1201 1052 SUPERFAMILY L domain-like 547 674 - -
Dere07g1201 1052 Gene3D Transferase(Phosphotransferase) domain 1 847 1048 - -
Dere07g1201 1052 SUPERFAMILY L domain-like 58 292 - -
Dere07g1201 1052 Gene3D Ribonuclease Inhibitor 371 674 IPR032675 -
Dere07g1201 1052 FunFam Tyrosine-sulfated glycopeptide receptor 1 342 675 - -
Dere07g1201 1052 CDD STKc_IRAK 777 1044 - -
Dere07g1201 1052 PRINTS Leucine-rich repeat signature 601 614 - -
Dere07g1201 1052 PRINTS Leucine-rich repeat signature 132 145 - -
Dere07g1201 1052 Gene3D Ribonuclease Inhibitor 295 370 IPR032675 -
Dere07g1201 1052 Pfam Leucine rich repeat 87 142 IPR001611 GO:0005515
Dere07g1201 1052 Pfam Leucine rich repeat 558 614 IPR001611 GO:0005515
Dere07g1201 1052 FunFam Leucine-rich repeat receptor-like kinase 38 153 - -
Dere07g1201 1052 Gene3D Ribonuclease Inhibitor 33 292 IPR032675 -
Dere07g1201 1052 FunFam Phytosulfokine receptor 1 734 846 - -
Dere07g1201 1052 PANTHER LEUCINE RICH REPEAT KINASE 2 299 1044 - -
Dere07g1201 1052 Pfam Leucine Rich repeat 466 482 IPR001611 GO:0005515
Dere07g1201 1052 Pfam Leucine rich repeat N-terminal domain 36 73 IPR013210 -
Dere07g1201 1052 ProSiteProfiles Protein kinase domain profile. 771 1046 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g1201 1052 ProSitePatterns Serine/Threonine protein kinases active-site signature. 893 905 IPR008271 GO:0004672|GO:0006468
Dere07g1201 1052 SUPERFAMILY L domain-like 206 529 - -
Dere07g1201 1052 SMART serkin_6 771 1046 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g1201 1052 SMART LRR_typ_2 129 152 IPR003591 -
Dere07g1201 1052 SMART LRR_typ_2 273 296 IPR003591 -
Dere07g1201 1052 SMART LRR_typ_2 467 491 IPR003591 -
Dere07g1201 1052 SMART LRR_typ_2 577 600 IPR003591 -
Dere07g1201 1052 SMART LRR_typ_2 601 624 IPR003591 -
Dere07g1201 1052 SMART LRR_typ_2 105 128 IPR003591 -
Dere07g1201 1052 SMART LRR_typ_2 345 369 IPR003591 -
Dere07g1201 1052 SMART LRR_typ_2 393 416 IPR003591 -
Dere07g1201 1052 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 243 338 - -
Dere07g1201 1052 FunFam Leucine-rich repeat receptor-like protein kinase 847 1051 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1201 Dere-ChrDere07 15402128 15405286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1201 227 645 Receptor kinase-like Gene Family AT1G55610 28.634 9.64e-28 119
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Dere07g1201 Pkinase 2.3e-44 CL0016