Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1135 ATGGTGGAGCAGGTGATTATGGGATGGTTAAAAGTTGAGGAAATTCGTGTAGGGAAAATGATATTAATGGAGAATTTTCTTTTTAATAGCCCTTATATGAAACATGTCTCTACATGGCTCTTATCCGATTATGAGCCGGCAATTGGATACCTGGCTACTTCAAGAGCCCTTCCACGACTTATTGACGTCGTTAAGAGTTCTAGTAAAGAGAAGTTCGTCCAAAACCATCATGCTGGGAGGATCATAGTGACAAACCTTAAAGCCAAGGAACGAGTGATGAAGCTAATGAATCATGAGAATGCTAAGGTCACAAAAAATGCACTACTCTATGCCCTGTACATTGCAAAGGGTCACTGTATAACTCACACTTACGACATCGTCTTCTTCCTCATCAATAGGTTGGAGAATGGAGTAAAGCACGGCAGCAACGAGCTGGAGAATGGAGAACAGCAGAGTAGAGCACGTCCTCATGCAGCAAGAGGAAAAAGATGA 492 0.4228 MVEQVIMGWLKVEEIRVGKMILMENFLFNSPYMKHVSTWLLSDYEPAIGYLATSRALPRLIDVVKSSSKEKFVQNHHAGRIIVTNLKAKERVMKLMNHENAKVTKNALLYALYIAKGHCITHTYDIVFFLINRLENGVKHGSNELENGEQQSRARPHAARGKR 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1135 163 Coils Coil 131 151 - -
Dere07g1135 163 SUPERFAMILY ARM repeat 72 109 IPR016024 -
Dere07g1135 163 Pfam V-ATPase subunit H 68 109 IPR011987 GO:0000221|GO:1902600
Dere07g1135 163 Gene3D - 51 115 IPR038497 -
Dere07g1135 163 PANTHER V-TYPE PROTON ATPASE SUBUNIT H 71 109 IPR004908 GO:0000221|GO:0046961|GO:1902600
Dere07g1135 163 MobiDBLite consensus disorder prediction 142 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1135 Dere-ChrDere07 14712865 14716147 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1135 32 74 Primary Pumps ATPases(2) AT3G42050 60.465 4.31e-09 52.4