Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1134 ATGGAAAAAGCCAAATCGTTGGGTTGGTGGGATCCAAAGACCAAAGCTGCGATTGTGACCAGGCCAAATCGTCGGGTTGCAAACAGAACCGACAAAAAGATCACCGCTGAAACTTTTAAGACCCTTCAATCGTTGATAAGTCATTTACGTTGTGAGATTATGAACCCCTACATGATGGATTCAACCTTGGATTTCTTGGTTCCGTCCTTGTGGGAGATCAAAGTTACAGTGGCAACTGCCATTTTTGTGATCCTCGCTTATTGGTTTTTTACGTACAGAACTGGGGACCTTGATGCTGATCGAGCACTTGTTGACAATTCTGGGGATGCTTCTGATGATAGAGACAAGATGGTCCCGTTTAGAGTAGATTCTCAGGGCAATTCGGCATACTTGATTAAGCTGGAACTTCTGGCTGCAAAGAATCTTATTGGTGCAAATTTAAACGGCACATCAGATCCTTATGCTATCATCACATGCGGCAATGAAAAGCGATTCAGTTCCATGGTTCCTGGTTCAAGAAATCCTATGTGGGGTGAGGAGTTCAATTTCTCTGTTGATGAACTTCCTGTCCAGATTAATGTCACGATATATGATTGGGATATAATTTGGAAAAGTGCTGTTCTAGGTTCAGTGACTGTTCCAGTTGAAAGTGAAGGACAAACTGGTGCAGTGTGGCATACATTAGATAGCCCATCAGGGCAGGTTTGTCTTCACATAAAAACAAGAAAACTGTCTGCAAATTCCACTAGGATGAATGGCTATGGTGGACCCAACCCTCGAAGAAGGATGCCTTTGGAAAAGCAAGGGCCAACTGTTGTTCATCAAAAGCCAGGGCCTCTTCAGACAATATTTAATCTTCTTCCAGACGAGGTTGTTGAACATAGTTATTCTTGTGCACTTGAGAGGTCATTTTTGTATCATGGTCGTATGTATGTATCGGCATGGCGCATTTGCTTCCATTCTAATGTGTTCTCAAAGCAAATGAAGGTGGTTATTCCATTTGAGGATATAGATGAGATTCGAAGGAGTCAACATGCATTTATTAATCCTTCTATAACCATTATTCTTCGCATGGGTGCTGGTGGACATGGGGTACCTCCTTTGGGAAGTCCTGATGGTAGAGTCAGATACAAGTTTGCATCATTTTGGAATAGGAATCATACATTTAGAAATTTACAACGTGCAGCTAAGATTTTCCATGAAATGATGGAAGCTGAGAAGAAGGAAAATGCAGAGTCAGAACTGCGTGCGCATAGTAGTTCTGTTAGAGGAAATAAGATAGTGGATAAGGCCCCTGAAGAAAACATGGAAATAACTGGAAAGTCTCAACCATTTATCAAAGAAGAGGCTTTAGTGGGTATATATAATGATGTTTTCCCCTGCGTGGCAGAGCAGTTCTTTAACTTACTATTAAATGATGATTCAAAATTTACTAGTGAGTATCGTTCAGTACGAAAGGATACTAATCTTGTGATGGGACAGTGGCATACAGCAGATGAATATGATGGTCAGGTCAGAGAGATAACCTTCAGAACCCTTTGTAAGAGTCCTATGTGCCCTCCAGACACTGCCATGACAGAGTGGCAACATGTTGTTCTATCACCAGACAAGAAAATACTGGTGTTTGAAACTGTGCAACAGGCACATGATGTTCCATTTGGGTCCTATTTTGAGGTGCATTGTAAATGGAGTTTGGAGACCATTGATGAAGGTTCAAGTACACTAGACATAAAAGTGGGTGCACACTTTAAGAAGTGGTGTGTGATGCAATCCAAAATCAAGGCAGGGGCGGTCAATGAGTACAAGAAAGAAGTTGAGGTGATGTTAGAAGTTGCCCGTTCTTATGTAAAGAACCATGCTTCTGGTGGTGAGATTGACACAGCGGTTTTGCCTCGTGGAACTTTGGACAGCTCCTAA 1917 0.4194 MEKAKSLGWWDPKTKAAIVTRPNRRVANRTDKKITAETFKTLQSLISHLRCEIMNPYMMDSTLDFLVPSLWEIKVTVATAIFVILAYWFFTYRTGDLDADRALVDNSGDASDDRDKMVPFRVDSQGNSAYLIKLELLAAKNLIGANLNGTSDPYAIITCGNEKRFSSMVPGSRNPMWGEEFNFSVDELPVQINVTIYDWDIIWKSAVLGSVTVPVESEGQTGAVWHTLDSPSGQVCLHIKTRKLSANSTRMNGYGGPNPRRRMPLEKQGPTVVHQKPGPLQTIFNLLPDEVVEHSYSCALERSFLYHGRMYVSAWRICFHSNVFSKQMKVVIPFEDIDEIRRSQHAFINPSITIILRMGAGGHGVPPLGSPDGRVRYKFASFWNRNHTFRNLQRAAKIFHEMMEAEKKENAESELRAHSSSVRGNKIVDKAPEENMEITGKSQPFIKEEALVGIYNDVFPCVAEQFFNLLLNDDSKFTSEYRSVRKDTNLVMGQWHTADEYDGQVREITFRTLCKSPMCPPDTAMTEWQHVVLSPDKKILVFETVQQAHDVPFGSYFEVHCKWSLETIDEGSSTLDIKVGAHFKKWCVMQSKIKAGAVNEYKKEVEVMLEVARSYVKNHASGGEIDTAVLPRGTLDSS 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1134 638 Gene3D C2 domain 120 245 IPR035892 -
Dere07g1134 638 ProSiteProfiles VASt domain profile. 450 620 IPR031968 -
Dere07g1134 638 PANTHER BAG-ASSOCIATED GRAM PROTEIN 1 58 626 IPR044655 -
Dere07g1134 638 FunFam BAG-associated GRAM protein 1 isoform X2 279 398 - -
Dere07g1134 638 CDD C2 132 228 - -
Dere07g1134 638 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 130 241 IPR035892 -
Dere07g1134 638 PRINTS C2 domain signature 147 159 IPR000008 -
Dere07g1134 638 PRINTS C2 domain signature 171 184 IPR000008 -
Dere07g1134 638 PRINTS C2 domain signature 192 200 IPR000008 -
Dere07g1134 638 SMART gram2001c 278 344 IPR004182 -
Dere07g1134 638 SMART C2_3c 131 227 IPR000008 -
Dere07g1134 638 Pfam GRAM domain 281 353 IPR004182 -
Dere07g1134 638 Gene3D - 279 397 IPR011993 -
Dere07g1134 638 Pfam C2 domain 133 227 IPR000008 -
Dere07g1134 638 ProSiteProfiles C2 domain profile. 112 228 IPR000008 -
Dere07g1134 638 Pfam VAD1 Analog of StAR-related lipid transfer domain 454 599 IPR031968 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1134 Dere-ChrDere07 14694100 14706739 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1134 150 216 C2H2 Transcription Factor Family AT4G21160 28.358 3.96e-06 47.4