Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1132 ATGACAGCTAGCTCTTTCTGCAATGCTGACTCTGTATTTTCGAGAGAAGAGGGCGTAGATATTAGAAAGATGATGGAGCCAAAAAGGAGCCTCTGCTCGGTGGATCAAAGCAGCTTTACCTCTATTGCCTCTAAAAGACATAAGGCTGATTTATCCATCACTACAAAGGAAAGGAAGGAGAAGATTGGGGAACGAATTGTTGCTCTGCAGCAGCTTGTTTCACCATTTGGAAAGTCAGATACAGCTTCTGTCCTTTTAGAGGCGACGCACTATATAAAGTTCCTTCATAAACAAGTTAAGGTGCTTAGTGCTCCTTATCTCCAGTGCTCTTCAACCAAAACGCAGGATATAGAGCCGTACAGCCTGAGGAATAGAGGATTATGTCTTGTACCTGTGTCGTATACGATTGGAGTAGCTCAGAGCAATGGTGCAGATATATGGGCCCCTATCAAGACCACTTCCCCAGCATTTGACTAG 477 0.4423 MTASSFCNADSVFSREEGVDIRKMMEPKRSLCSVDQSSFTSIASKRHKADLSITTKERKEKIGERIVALQQLVSPFGKSDTASVLLEATHYIKFLHKQVKVLSAPYLQCSSTKTQDIEPYSLRNRGLCLVPVSYTIGVAQSNGADIWAPIKTTSPAFD 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1132 158 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 41 135 - -
Dere07g1132 158 FunFam Transcription factor bHLH113 family 45 120 - -
Dere07g1132 158 Gene3D - 43 116 IPR036638 GO:0046983
Dere07g1132 158 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 46 95 IPR011598 GO:0046983
Dere07g1132 158 CDD bHLH_AtbHLH_like 52 103 IPR045239 -
Dere07g1132 158 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 52 110 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1132 Dere-ChrDere07 14685188 14689100 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1132 24 157 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05710 59.494 8.56e-59 178