Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1122 ATGACTATAGACTTCTTGTCGAAGCTTAGAATTATGGTGCATGTGGACCTTCCCAATATTGCTAAATTCATTGGATATTATCCCCGGAAAAAAGCATCAAACAAGGCTGGTAGTGCTGGCAGAGCCATCATGAATAACGATGACCACATCCACAACGGGTGCGAAGAAGATCAAAGGAACAAAGATGGTACCGTCGCAAGCCAAGACTCCAGATTCAATCAGACCCTTAGGAATGTTCAGGGCTTACTGAAAGGTCGCAGCATCCCTGGTAAAATATTATTGACTCGAAAATCAGACCCGCTAGATAACTCAAACTCAAAGGAGTATACACCAAATTACGAAAGGAGCTTCTCCTTCAATGATGCTGGCACAATTGATCACCCAGCTAAGGCAGTAGAGGAAGAAGTCCAGAGTACAAGCAAACCAATCAGTATTGCCAATGTGAATAAGTTTAAAAAATCAAACTCTAACGTTGAAAACTCATCTGAAGAAGTCCAGAAATCTTCCATGGGTGCTCGAGCTACAGATTCTGCAAGAGTTATGAAGTTCACTAAGGTGCTTTCTGGGACGACAGTAACATTAGAAAAGTTGCGTGAATTATCTTGGAGTGGTGTTCCAAATTACATGCGCCCTACAGTATGGAGGCTTCTCTTGGGATATGCACCACCTAATTCAGATAGAAGGGAGGGAGTTCTGAAAAGGAAGCGCCTTGAGTATCTTGACTGTGTTTCTCAGTATTATGATATTCCTGATACACAACGTTCAGATGATGAAATAAACATGCTTCGCCAGATTGCTGTTGATTGTCCAAGAACTGTACCTGATGTTCCCTTCTTCCAGCAACAACAAGTTCAGAAATCATTGGAACGCATTCTTTATACATGGGCCATTCGGCATCCTGCAAGTGGATACGTTCAGGGAATTAATGATCTTGTTACGCCGTTTTTAGTTGTTTTCCTATCAGAATACTTAGAAGGGGGTATAGATAATTGGTTAATGTCTGATTTATCTTCAGATAAAATTTCTAATATAGAGGCTGACTGCTATTGGTGCTTATCAAAGTTGCTTGATGGTATGCAAGACCATTACACATTTGCCCAACCAGGAATTCAGAGGCTTGTTTTCAAGTTGAAGGAAATAGTCAGGAGAATTGATGAGCCTGTTTCTAGACATGTGGAGGATCAAGGGCTAGAATTTCTTCAGTTTGCTTTCCGCTGGTTCAACTGTCTTCTGATCCGCGAGATACCCTTCCATCTCATCACACGCCTTTGGGACACATATCTAGCTGAAGGAGATGCCTTACCAGATTTCCTTGTGTATATATTTGCCAGTTTTCTTCTGACGTGGTCAGATAAGCTCCAGAAGCTTGATTTCCAAGAGCTGGTAATGTTCCTCCAACACCTTCCAACGCAGAACTGGTCTCACCAGGAGCTTGAGATGGTGCTTTCTCGCGCTTTTATGTGGCACAGCATGTTCAACAACTCTCCCAGTCATTTAGCTAGCTAG 1506 0.423 MTIDFLSKLRIMVHVDLPNIAKFIGYYPRKKASNKAGSAGRAIMNNDDHIHNGCEEDQRNKDGTVASQDSRFNQTLRNVQGLLKGRSIPGKILLTRKSDPLDNSNSKEYTPNYERSFSFNDAGTIDHPAKAVEEEVQSTSKPISIANVNKFKKSNSNVENSSEEVQKSSMGARATDSARVMKFTKVLSGTTVTLEKLRELSWSGVPNYMRPTVWRLLLGYAPPNSDRREGVLKRKRLEYLDCVSQYYDIPDTQRSDDEINMLRQIAVDCPRTVPDVPFFQQQQVQKSLERILYTWAIRHPASGYVQGINDLVTPFLVVFLSEYLEGGIDNWLMSDLSSDKISNIEADCYWCLSKLLDGMQDHYTFAQPGIQRLVFKLKEIVRRIDEPVSRHVEDQGLEFLQFAFRWFNCLLIREIPFHLITRLWDTYLAEGDALPDFLVYIFASFLLTWSDKLQKLDFQELVMFLQHLPTQNWSHQELEMVLSRAFMWHSMFNNSPSHLAS 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1122 501 SMART tbc_4 201 457 IPR000195 -
Dere07g1122 501 MobiDBLite consensus disorder prediction 98 115 - -
Dere07g1122 501 FunFam TBC1 domain family member 178 230 - -
Dere07g1122 501 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 240 365 - -
Dere07g1122 501 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 183 391 IPR035969 -
Dere07g1122 501 FunFam TBC domain containing protein 234 365 - -
Dere07g1122 501 Pfam Rab-GTPase-TBC domain 209 452 IPR000195 -
Dere07g1122 501 PANTHER TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN 161 474 - -
Dere07g1122 501 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 367 489 IPR035969 -
Dere07g1122 501 ProSiteProfiles TBC/rab GAP domain profile. 204 431 IPR000195 -
Dere07g1122 501 FunFam TBC domain containing protein 366 501 - -
Dere07g1122 501 MobiDBLite consensus disorder prediction 48 64 - -
Dere07g1122 501 MobiDBLite consensus disorder prediction 38 70 - -
Dere07g1122 501 Gene3D - 181 233 - -
Dere07g1122 501 Gene3D - 366 501 - -
Dere07g1122 501 MobiDBLite consensus disorder prediction 96 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1122 Dere-ChrDere07 14598342 14607969 Dispersed/Wgd