Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1121 ATGGCTGTGAACGATGCTGAACAATCACACAGGCCTCACAGGTCTCGTCAGTCTGGTGCATCTTCTAAAAAGAAGTCTAAATCAGGCAAGAAGAAGATGCATGAACTTGGCGGGGATCAGAAAAGACAAAACCCTAAGGCATTTGCTTTTTCTTCCTCTGTGAAAGCCAAGAGATTACAATCCCGTGCTGTCGAAAAAGAGCAGCGGCGTCTTCATGTTCCAATTATTGACCGGTCTTATGGTGAGCCAGCCCCTTATGTCGTTGTAGTGCAGGGCCCCCCCAAGGTTGGGAAGTCACTCTTAATAAAGTCCTTGGTAAAACATTATACGAAGCATAATTTGCCTGATGTTCGAGGTCCAATAACCATAGTATCAGGAAAGCAAAGGCGACTGCAGTTTGTGGAATGCCCAAATGATATCAATGGCATGATAGATGCAGCAAAGTTTGCAGACCTAGCATTGCTTCTTATAGACGGGAGTTATGGTTTTGAAGTGGAAACCTTTGAATTTCTTAACATATTGCAAGTTCATGGCTTCCCAAAGGTCATGGGAGTTCTGACTCATCTTGATAAATTCAAGGATGCTAAAAAGTTGAAGAAAACAAAGCAGCGTCTTAAACATCGATTCTGGACTGAGATATATGATGGAGCTAAATTGTTTTATTTATCAGGTCTTATTCATGGAAAGTATCCTAAGCGTGAAGTGCACAATCTTGCTCGCTTTATTTCTGTTATGAAGTTTCATCCTTTATCTTGGCGAACTTCTCACCCATATGTTTTGGTGGATCGGTTTGAAGATATCACTCCTCCTGAAAGAGTGCAAGAAAATAATAAATGTGACAGAAAAATCACAATTTATGGTTATTTGAGAGGGTGCAATTTGAAGAAGGGAAATAAGGTGCACATAGCAGGAGTGGGTGATCATAGTTTAGCTGGTGTCACTGTTTTGCCTGATCCTTGTCCTCTACCATCTGCTGCGAAAAAGAAGGGACTGCGTGATAGGGAGAAGTTATTCTATGCTCCCATGTCTGGCCTTGGGGATCTTTTGTACGACAAAGATGCTGTGTACATAAATATCAATGATCACTTTGTTCAGTTTTCAAAAGCTGATGACGAAAATTTAGCCATGGCAGGCAAAGGAAAGGACAGAGATGTGGGGGCAGTTTTGGTGAGATCACTTCAGAATACCAAATACTCAATTAATGAAAAACTAGAGAGCAGCACTATTAATCTTTTTAGCCAAAAATCAAATGTGTCATCAGATGCTCTAGATGATGCACAGGGTGGAAATGTTGAGAATAATGAAATGGATATGGATGGTTCAGAATCATCTGATCAAGATGAAGCTGTTCCACAAGATGGCATCACAGATAGTGAAACTAGTGGTTCTGATGAAGAAGATGGTGTTACAACAGCTTGTAAACCTACAAGTCAAGATCACTTAAAAGAACATGTTGAGTTTCATAATGGAAGACTGAGGAGACGAGCATTGTTCGGGAATGATGTTGATCAAAATGATTTGAAGGATTCAGATGAAGAGGATGGAGCTGTCGGTGATGATGCAGCATCTTCTGATGACTCAGAATATTCAGAAGATGGGGATGCTGATGATACAGATGAAGATGACATGGGAAATGTTTCAAAGTGGAAAGAGTCTTTGGCAGAAAGAACTATCTCACAGCAAACTCCTAGCCTGATGCAACTTGTGTATGGGAAGTCTACAGTTAATTCAACCAATGTAAACAAAGAGAGCGATAGTAGTGAGGGGGAGGAAAGTGAAGATGAATTTTTTAAGCCTAAAGAAGAAGTTAAAAAGCAAAAAATGAGAGAGGGTTTGGATTGTGGAATTGTCAATACTGAGGACTGTTCCAAGACAGCAAACTTTGTGGATGTCAAATGCTGGGAAGAGAAAGACTTTGAGCACATTCGTGACCGTTTTGTCACCGGTGATTGGTCAAAAGCTGCGCTCAGAAACCAAGTGTCTGGGGCTAATACTGAAGAGGAATATGATGCTGTCTATGGTGACTTTGAAGATTTAGAAGCGGGAGGGCTGCATGAGAGTCATCAGACAGATAGTGAAGTTGCTGGGACAGTAGAGAAGGGAGAGGACTTGGAAGCTGAAGAGCGGAGGCTCAAAAAACTTGCTCTACGTGCAAAATTTGATGCTCAATATCCTTTTTTCCTCTAGGAAGAAGCTAGTAATAAAGATGGGGACAAGTTCCACTGTGCTCAAGCTAATGAAAGTAGCTATTTTGATAAGTTGAAGGAGGAAATTGAACTTCGGAAACAGATGAATATAGCTGAACTTGATGATCTTGATGAAGCTACCCGATTAGAGATAGAAGGCTTTCGAACAGGGAGTTACTTAAGATTGGAGGTTCATGATGTTCCGTGTGAAATGGTTGAATACTTTGATCCTTACCACCCAATATTAGTAGGAGGGATTGGTCTTGCAGAGGAAAACGTTGGATACATGCAGGCCAGGTTTAAGCGGCATAGATGGCACAAGAAAGTTCTGAAGACTAGAGACCCTATAATTGTTTCTGTTGGATGGAGGCGTTACCAGACAACCCCAGTTTATGCTATTGAGGATCGCAATGGTAGGCATCATATGCTTAAATACACTCCAGAACATATGCATTGCCTTGCTATGTTTTGGGGCCCCCTTGCCCCTCTTAACACTGGGATAGTTGCTGTTCAGAACTTGTCAAACAATCAGGAATCATTTAGGATTACTGCAACTGCTGTTGTACTTGAGTTTAATCATGCAGCAAGGATAGTGAAGAAATTAAAGTTGGTTGGTTACCCGTGCAAGATATTCAAGAAGACAGCACTTATTAAGGATATGTTCACTTCAGATCTTGAAGTAGCTAGGTTTGAAGGTGCAGCTATTCGAACAGTCAGTGGGATCAGGGGGCAGGTCAAGAAGGCTGCAAAAGAAGAAATAGGTAACGAGCCAAAGAGGAAGGGAGGCCAACCCAAAGAAGGAATTGCTCGGTGCACTTTTGAGGACAAAATTTTGATGAGCGACATTGTTTTCTTGCGTGCATGGACTCAAGTTGAAGTTCCTCAGTTTTATAATCCCTTGACAACAGCATTGCAGCCTCGTGAGCAGACCTGGCGAGGAATGAAAACTGTTGCTGAATTGAGAATGGAACAGAATCTTCCTATACCTGTAAACAAAGATTCACTTTACAAGAAAATTGAAAGAAAGCCGAGGAAGTTCAATCCATTGGTGATCCCTAAGTCTCTACAGGAATCTCTTCCATTTGCATCAAAGCCTAAAGATACACCCAGTCGAAAACGGCCATCACTTGCTCAGAAAAGGGCTGTTGTCTGGGATTCTCATGAGCGCAAAGTCCATGCCCTTGTTCAACAGCTCCAGTTAATTAGAAATGAGAAGTTGAAAAAGCGAAAGCTTAAGGAAGAGAAGAAGCGGAAAGAATATGAAGCTGAGAAAGCAAAAGATGAACAGTTGTTAAGAAAGCGCCGGAGAGAGGAACGGCGGGAGAGATATCGTGGGCAAGAAAAACTGAAGAAAATTCGGAGAGCAGAGGTCTGA 3561 0.4173 MAVNDAEQSHRPHRSRQSGASSKKKSKSGKKKMHELGGDQKRQNPKAFAFSSSVKAKRLQSRAVEKEQRRLHVPIIDRSYGEPAPYVVVVQGPPKVGKSLLIKSLVKHYTKHNLPDVRGPITIVSGKQRRLQFVECPNDINGMIDAAKFADLALLLIDGSYGFEVETFEFLNILQVHGFPKVMGVLTHLDKFKDAKKLKKTKQRLKHRFWTEIYDGAKLFYLSGLIHGKYPKREVHNLARFISVMKFHPLSWRTSHPYVLVDRFEDITPPERVQENNKCDRKITIYGYLRGCNLKKGNKVHIAGVGDHSLAGVTVLPDPCPLPSAAKKKGLRDREKLFYAPMSGLGDLLYDKDAVYININDHFVQFSKADDENLAMAGKGKDRDVGAVLVRSLQNTKYSINEKLESSTINLFSQKSNVSSDALDDAQGGNVENNEMDMDGSESSDQDEAVPQDGITDSETSGSDEEDGVTTACKPTSQDHLKEHVEFHNGRLRRRALFGNDVDQNDLKDSDEEDGAVGDDAASSDDSEYSEDGDADDTDEDDMGNVSKWKESLAERTISQQTPSLMQLVYGKSTVNSTNVNKESDSSEGEESEDEFFKPKEEVKKQKMREGLDCGIVNTEDCSKTANFVDVKCWEEKDFEHIRDRFVTGDWSKAALRNQVSGANTEEEYDAVYGDFEDLEAGGLHESHQTDSEVAGTVEKGEDLEAEERRLKKLALRAKFDAQYPFFLXEEASNKDGDKFHCAQANESSYFDKLKEEIELRKQMNIAELDDLDEATRLEIEGFRTGSYLRLEVHDVPCEMVEYFDPYHPILVGGIGLAEENVGYMQARFKRHRWHKKVLKTRDPIIVSVGWRRYQTTPVYAIEDRNGRHHMLKYTPEHMHCLAMFWGPLAPLNTGIVAVQNLSNNQESFRITATAVVLEFNHAARIVKKLKLVGYPCKIFKKTALIKDMFTSDLEVARFEGAAIRTVSGIRGQVKKAAKEEIGNEPKRKGGQPKEGIARCTFEDKILMSDIVFLRAWTQVEVPQFYNPLTTALQPREQTWRGMKTVAELRMEQNLPIPVNKDSLYKKIERKPRKFNPLVIPKSLQESLPFASKPKDTPSRKRPSLAQKRAVVWDSHERKVHALVQQLQLIRNEKLKKRKLKEEKKRKEYEAEKAKDEQLLRKRRREERRERYRGQEKLKKIRRAEV 1186
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1121 1186 MobiDBLite consensus disorder prediction 506 541 - -
Dere07g1121 1186 SMART aarp2cn2 234 320 IPR012948 GO:0005634|GO:0042254
Dere07g1121 1186 MobiDBLite consensus disorder prediction 1 52 - -
Dere07g1121 1186 PANTHER RIBOSOME BIOGENESIS PROTEIN 6 1169 IPR039761 GO:0042254
Dere07g1121 1186 Pfam AARP2CN (NUC121) domain 234 319 IPR012948 GO:0005634|GO:0042254
Dere07g1121 1186 FunFam BMS1 ribosome biogenesis factor 86 248 - -
Dere07g1121 1186 ProSiteProfiles Bms1-type guanine nucleotide-binding (G) domain profile. 84 248 IPR030387 -
Dere07g1121 1186 SMART DUF663_2 697 1020 IPR007034 -
Dere07g1121 1186 MobiDBLite consensus disorder prediction 577 602 - -
Dere07g1121 1186 MobiDBLite consensus disorder prediction 16 31 - -
Dere07g1121 1186 MobiDBLite consensus disorder prediction 1134 1186 - -
Dere07g1121 1186 Coils Coil 1123 1169 - -
Dere07g1121 1186 Gene3D - 86 248 IPR027417 -
Dere07g1121 1186 MobiDBLite consensus disorder prediction 683 702 - -
Dere07g1121 1186 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 84 221 IPR027417 -
Dere07g1121 1186 CDD BMS1 47 276 IPR037875 GO:0005525
Dere07g1121 1186 MobiDBLite consensus disorder prediction 502 560 - -
Dere07g1121 1186 Pfam 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal 699 1021 IPR007034 -
Dere07g1121 1186 MobiDBLite consensus disorder prediction 1086 1107 - -
Dere07g1121 1186 MobiDBLite consensus disorder prediction 420 487 - -