Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1111 ATGCACAGCAACAACAACCACACTTCCACCAGCCGCTCCTCCGACTCTGGCGACCCGTCAGACGACTCCAAATGGGCCCACAAGCTCCTCCGAGAGTGTGCCAGAGCCATCTCCGACGGCGACTCCCCCAGAATCCACCACCTCCTCTGGATGCTCAACGAGCTTGCCTCCCCTTACGGCGACTGCGATCAGAAGCTCGCCTCCTACTTCCTGCAAGCCCTATTCTGTAAGGCCACAGAGTCCGGCCAACGATGCTACAAGACCCTCTCCTCCGTCGCCGAGAAATCCCACTCCTTCGACTCCGCCAGAAAGCTCATACTCAAGTTTCAAGAGGTCAGCCCTTGGACCACCTTCGGCCACGTGGCTTCCAACGGCGCTATTCTCGAAGCCTTAGAGGGCGAGACCAAGCTTCACATAATCGACATAAGCAACACGCTTTGCACTCAGTGGCCTACTCTGTTGGAAGCCTTGGCCACCCGAAACGACGAAACTCCGCGCCTCAAGCTCACCGTCGTTTTGACCGGAAGCATAGCGGTAGGGTCAGTGATGAAGGAAGTGAGGCAAAGGATGGAGAAGTTTGCGAGGCTAATGGGAGTGCCGTTTGAGTTGAACGTGGTGATCGGGTTGAATCACTTGGGAGAACTAACAAAAGAAGGATTGGGAGTGCAAGAGGACGAGGCTATTGCCGTGAATTGCGTAGGAGCGTTGAGGAGAGTAGAAGTGGAGGAGAGAGACGGCGTGATTCGCTTGTTCAAATCGCTGAATCCTCGCGTGGTCACGGTGGTGGAGGAAGAAGCTGATTTTTCGAGCACAAGGAATGAGTTCGTGCAGGGGTTCGAAGAGTGTCTGAGGTTCTTCTCGCTGTACTTTGAGACGCTGGAGGAAAGCTTTCCAGCGACGAGTAACGAGAGATTGATGCTGGAGAGGGAGTGTTCGAGAAGCATAGTTAGGGTTTTGGCTTGCGGGGATGAGGAAGGAGAGTGTGAGAGAAGGGAGAGAGGGAGGCAGTGGAGTGAGAGGCTGAAGCAGGAGTTTTTCCCCGTTGGGTTCAGCGACGACGTTTTGGATGATGTGAAGGCATTGCTGAAACGGTACAGACCAGGGTGGTCGCTGGCGGTGCCGCAAGGAGACGACGTGTCGTCGGGAATTTACTTGAACTGGAAGGAGGAACCAGTGGTTTGGGCTTCAGCATGGAAACCCTAA 1203 0.5486 MHSNNNHTSTSRSSDSGDPSDDSKWAHKLLRECARAISDGDSPRIHHLLWMLNELASPYGDCDQKLASYFLQALFCKATESGQRCYKTLSSVAEKSHSFDSARKLILKFQEVSPWTTFGHVASNGAILEALEGETKLHIIDISNTLCTQWPTLLEALATRNDETPRLKLTVVLTGSIAVGSVMKEVRQRMEKFARLMGVPFELNVVIGLNHLGELTKEGLGVQEDEAIAVNCVGALRRVEVEERDGVIRLFKSLNPRVVTVVEEEADFSSTRNEFVQGFEECLRFFSLYFETLEESFPATSNERLMLERECSRSIVRVLACGDEEGECERRERGRQWSERLKQEFFPVGFSDDVLDDVKALLKRYRPGWSLAVPQGDDVSSGIYLNWKEEPVVWASAWKP 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1111 400 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 26 389 IPR005202 -
Dere07g1111 400 ProSiteProfiles GRAS family profile. 17 399 IPR005202 -
Dere07g1111 400 MobiDBLite consensus disorder prediction 1 23 - -
Dere07g1111 400 Pfam GRAS domain family 28 399 IPR005202 -
Dere07g1111 400 MobiDBLite consensus disorder prediction 1 16 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1111 Dere-ChrDere07 14479121 14480323 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1111 2 400 GRAS Transcription Factor Family AT4G37650 54.087 9.10e-150 433
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Dere07g1111 GRAS 2.1e-96 CL0063