Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1110 ATGCCTAAACAAATCCATGAGATTAAAGACTTCCTTCTGACAGCCCGAAGGAAGCATGCACGCTCTGTGAAAATCAAGCGGAGCAAGGATGTGGTCAAGTTCAAGGTGCGTTGCTCCAAGTACCTGTACACCTTATGTGTGTTTGACTCCGAGAAGGCTGATAAGTTGAAGCAATCACTCCCTCCAGGTTTGACTGTGCAAGACCTGCGATCCTCTGATCGGTAG 225 0.48 MPKQIHEIKDFLLTARRKHARSVKIKRSKDVVKFKVRCSKYLYTLCVFDSEKADKLKQSLPPGLTVQDLRSSDR 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1110 74 Gene3D - 1 70 IPR038464 -
Dere07g1110 74 PANTHER 60S RIBOSOMAL PROTEIN L38 1 69 IPR002675 GO:0003735|GO:0005840|GO:0006412
Dere07g1110 74 FunFam 60S ribosomal protein L38 1 70 - -
Dere07g1110 74 Pfam Ribosomal L38e protein family 2 68 IPR002675 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1110 Dere-ChrDere07 14474133 14475626 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1110 1 69 Cytoplasmic Ribosomal Protein Gene Family AT3G59540 92.754 4.78e-43 132