Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1100 ATGAAAATCCAGTGTGATGTGTGTGAGAAAGCTCCGGCAACGGTGATTTGTTGCGCCGACGAGGCGGCTTTGTGTGCCAAATGCGACATTGAAGTTCATGCGGCCAACAAGCTTGCCAGCAAGCACCAGAGGCTTCTCCTTCAGTGCCTCTCAAACAAGCTTCCCACATGTGACATCTGCCAAGACAAGCCAGCTTTCATATTTTGTGTTGAAGACAGAGCTCTCTTCTGTCAAGATTGTGATGAACCAATTCACTCAGCTGGCAGTCTTTCTGCAAATCACCAGCGCTTCCTTGCAACTGGTATCCGAGTGGCTTTGAGTTCTAACTGCACCAAAGACAGTGAAGAAGGGCGCTTAGAGCCACCTCATCGAAATGCACAACAAGCTTCTGTAAAAATCCCACCTCAGCCCCAGCAAGTCCCTACCTTCACATCCTCTTGGGCTGTGGATGACTTGTTGGAATTCACTGACTTTGAATCAACTGACAAGAAAGAATCACTTGAGTTTGGAGAGCTGGAATGGTTATCGGAGGTAAGTCTTTTTGGAGAACAATTTCCTGAGGAAGCTTTGGCTGCAGCTGAAGTCCCACAGCTTCCAGTAACACACGCTAGCAATGTTGCCTCTTACAGACCCTCTAAGTCCTATATGTCTCTCAAGAAGCCTAGGATTGAATTTGAAGATGATGATGAGCACTTCACTGTGCCTGATCTTGGCTGA 717 0.4742 MKIQCDVCEKAPATVICCADEAALCAKCDIEVHAANKLASKHQRLLLQCLSNKLPTCDICQDKPAFIFCVEDRALFCQDCDEPIHSAGSLSANHQRFLATGIRVALSSNCTKDSEEGRLEPPHRNAQQASVKIPPQPQQVPTFTSSWAVDDLLEFTDFESTDKKESLEFGELEWLSEVSLFGEQFPEEALAAAEVPQLPVTHASNVASYRPSKSYMSLKKPRIEFEDDDEHFTVPDLG 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1100 238 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 237 - -
Dere07g1100 238 CDD Bbox1_BBX-like 5 47 - -
Dere07g1100 238 SMART bboxneu5 4 47 IPR000315 GO:0008270
Dere07g1100 238 SMART bboxneu5 52 99 IPR000315 GO:0008270
Dere07g1100 238 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Dere07g1100 238 Gene3D Classic Zinc Finger 1 95 - -
Dere07g1100 238 CDD Bbox1_BBX-like 57 98 - -
Dere07g1100 238 ProSiteProfiles Zinc finger B-box type profile. 52 99 IPR000315 GO:0008270
Dere07g1100 238 MobiDBLite consensus disorder prediction 113 139 - -
Dere07g1100 238 Pfam B-box zinc finger 52 95 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1100 Dere-ChrDere07 14372726 14374342 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1100 1 163 Orphan Transcription Factor Family AT1G06040 65.882 3.98e-70 211
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF DBB Dere07g1100 zf-B_box 1.4e-08 No_clan