Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1089 ATGGAATTCTCAATAAGACATCTCTTAATCTCCATTTTGAATGTGAATCCATGGCCTCCTCCTAGGTTTCTCTTCGAAGTTGCTGTTGTTTTATTATATTTGTGGTCGACTGTCTCGGGTCTGGGTTCCATGTCTTCTATTGCCATCTCTTATGGTGAAAAAGGTTCTGTCTTTTGTGGTTTGCGATCAGATGGATCTCATACTGTGACCTGTTACGGATCAAACTCAGCCATAGTCTATGGAATACCAAACCATTTCCCACTTCTGGGTCTAACCGCAGGTGATGGCTTTGTCTGTGGACTCCTAATGGATTCTTTCCAACCTTATTGTTGGGGTAGCAGTGGCTACATTGAAATGGGTGTTCCACAACCGATGACTAAAGGAGCAGAGTACCTAGAAATCAGTGCTGGGGATTACCATGTTTGTGGATTGAGGAAACCCTTGACAGGAAGACGTAGAAACATCTCTCTTGTCGATTGTTGGGGTTACAACATGACCAAGAACTATGTTTTTGATGGCCAGATTCAATCTATCTCAGCCGGTTCTGAATTCAACTGTGGGTTATTTTCCCAGAACAGAACTGTGTTCTGCTGGGGTGATGATACCAGTAGCAGAGTAATCAGTTTAGTTCCAAAAGACAAGAAATTCCATAAGATTTCTGCAGGTGGGTATCATGTGTGTGGAATTTTAGAAGGGGTGAATTCCAGAACTGTTTGTTGGGGAAGGAGTTTGGACATTGAGGAAGAAATTTCAGTGAGACAAACTGGTCAAGGCAACGTTGATTTGGCTCCAAATGAACCCATGCTCTCTGTAGTGGGAGGAAGATTTCATGCCTGTGGCATTAAGACTTATGATCACGGGGTGATTTGTTGGGGTTTTGTCATCAAAGGAAGCACCCCAACTCCTAGTGGGGTTAAGGTATTTGAGATTGCTGCCGGAAATTATTTCACTTGTGGAATACTTGCTCAGAAATCTCTTCTTCCTGCTTGTTGGGGTGTTGGCTTCCCTACTTCTCTTCCAATAGCTGTTTCTCCTGGATTATGCCAGCCCAATCCATGTCCTCCTGGTTTCTATGAAATTGAACAGCCAAAGGGTCGTTGCAAGTCGCCCGATTCTCACATTTGCGTGCCCTGCAGTGAAACTTGTCCTGCTGAAATGTATCAGAAAAGTGAGTGCAATTATACATCTGACATACAATGTGAATACAATTGTTCTAGTTGTTCCTCCCCTGCATGCTTTTCGAATTGCTCTTCAGATTCCAATGCTTCCATGGGGAAGAAAGATGAGAAATTTTGGTCTTTGCAGTTACCAGTGGTTATTGCAGAGATTGCTTTTTCTGTTTTCTTTGTAAGTATTGTAACCTTGACTGCTGTTTTGTATGTTCGCTACAAGCTACGAGGTTGTCGGTGTTCCATAGAAGGATCAAACGTGAGGAAACTTCATGGTAGTAATTCTTCCTTTCAAAAAGAGAACAGCAAGATCAGTCCAGACTTGGAGGAGCTCAAGATCAGGAGGGCTCAAACATTTACCTATGAGGAACTCGAAAGAGCAACAGACGGGTTCAAAGAAGACTCCATAGTTGGTAAGGGAAGTTTTTCGTGTGTATTCAAAGGAGTATTGAAAGATGGGACTGTTGTAGCAGTTAAAAGGGCGATAATGTCTCCCAACATGCAGAAGAATTCCAAAGAGTTTCATACAGAGCTTGACTTACTTTCCAGATTGAACCATGCCCATTTGCTCAACCTACTAGGATATTGTGAAGAAGGCGGAGAAAGGCTTCTTGTTTATGAATTCATGGCTCATGGCTCCTTGCACCAACACCTCCATGGGAAAAACAAGGCTTCCAAAGAGCAGTTGGATTGGGTTAGAAGGGTAACAATTGCAGTCCAAGCAGCTAGAGGAATTGAATATTTACATGGTTATGCCTGCCCACCTGTGATTCATAGAGACATCAAATCTTCAAACATCCTGATTGATGAAGAACACAATGCTAGGGTTTCTGATTTTGGCTTGTCGTTACTGGGTCCTGCAGATAGTGGCTCCCCATTGGCTGAACTACCTGCCGGGACACTTGGCTATCTTGATCCCGAATATTATAGGCTTCATTACCTTACCACAAAATCTGATGTCTATAGCTTTGGCGTTCTGCTCTTGGAAATTCTAAGTGGTAGAAAAGCCATTGACATGCAATACGAAGAAGGTAATATAGTTGAATGGGCAGTGCCGTTGATCAAGTCAGGAGATATCGCTGCAATTTTAGACCCAGTTCTGAAACCCCCATCTGATCTCGAAGCCTTGAAAAGAATCGCAAACGTGGCTTCTAAATGCGTGAGGATGAGAGGGAAGGAGAGGCCATCAATGGACAAAGTGACAACAGCTTTGGAGCGAGCTTTAGTGCAACTAATGGGTAGTCCAAGCAATGAGCAGCCAATTTTGCCCACTGAGGTGGTGTTGGGAAGTAACAGACTACACAAGAAATCATCTCAAAGATCTTCCAACAAGTCAGCTTCAGAAACTGATGTGGGAGAAGCTGAGGATCAGGGGTTTGAGTTCAGAGCACCCTCATGGATAACTTTTCCGAGTGTTACTTCTTCTCAAAGAAGGAAGTCTTCAGTGTCAGAGGGTGATGTTGACGGGAAAACTTCAGAAGTGAAGAACTTGGGAAACGTTAGTGGTGGAGACGCTTTGAGGAGTCTTGAGGAAGAGATTGGACCTGCTTCTCCACAAGAGAGGCTGTTCCTGCAGCACAACTTCTGA 2757 0.4363 MEFSIRHLLISILNVNPWPPPRFLFEVAVVLLYLWSTVSGLGSMSSIAISYGEKGSVFCGLRSDGSHTVTCYGSNSAIVYGIPNHFPLLGLTAGDGFVCGLLMDSFQPYCWGSSGYIEMGVPQPMTKGAEYLEISAGDYHVCGLRKPLTGRRRNISLVDCWGYNMTKNYVFDGQIQSISAGSEFNCGLFSQNRTVFCWGDDTSSRVISLVPKDKKFHKISAGGYHVCGILEGVNSRTVCWGRSLDIEEEISVRQTGQGNVDLAPNEPMLSVVGGRFHACGIKTYDHGVICWGFVIKGSTPTPSGVKVFEIAAGNYFTCGILAQKSLLPACWGVGFPTSLPIAVSPGLCQPNPCPPGFYEIEQPKGRCKSPDSHICVPCSETCPAEMYQKSECNYTSDIQCEYNCSSCSSPACFSNCSSDSNASMGKKDEKFWSLQLPVVIAEIAFSVFFVSIVTLTAVLYVRYKLRGCRCSIEGSNVRKLHGSNSSFQKENSKISPDLEELKIRRAQTFTYEELERATDGFKEDSIVGKGSFSCVFKGVLKDGTVVAVKRAIMSPNMQKNSKEFHTELDLLSRLNHAHLLNLLGYCEEGGERLLVYEFMAHGSLHQHLHGKNKASKEQLDWVRRVTIAVQAARGIEYLHGYACPPVIHRDIKSSNILIDEEHNARVSDFGLSLLGPADSGSPLAELPAGTLGYLDPEYYRLHYLTTKSDVYSFGVLLLEILSGRKAIDMQYEEGNIVEWAVPLIKSGDIAAILDPVLKPPSDLEALKRIANVASKCVRMRGKERPSMDKVTTALERALVQLMGSPSNEQPILPTEVVLGSNRLHKKSSQRSSNKSASETDVGEAEDQGFEFRAPSWITFPSVTSSQRRKSSVSEGDVDGKTSEVKNLGNVSGGDALRSLEEEIGPASPQERLFLQHNF 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1089 918 SUPERFAMILY RCC1/BLIP-II 259 338 IPR009091 -
Dere07g1089 918 MobiDBLite consensus disorder prediction 822 838 - -
Dere07g1089 918 ProSitePatterns Protein kinases ATP-binding region signature. 527 549 IPR017441 GO:0005524
Dere07g1089 918 Pfam Protein tyrosine and serine/threonine kinase 524 793 IPR001245 GO:0004672|GO:0006468
Dere07g1089 918 Gene3D - 87 345 IPR009091 -
Dere07g1089 918 FunFam Serine/threonine-protein kinase-like protein CR4 40 207 - -
Dere07g1089 918 ProSiteProfiles TNFR/NGFR family cysteine-rich region domain profile. 352 400 IPR001368 GO:0005515
Dere07g1089 918 SUPERFAMILY Protein kinase-like (PK-like) 500 794 IPR011009 -
Dere07g1089 918 MobiDBLite consensus disorder prediction 862 908 - -
Dere07g1089 918 FunFam Receptor protein kinase CRINKLY4 599 801 - -
Dere07g1089 918 PANTHER SERINE/THREONINE-PROTEIN KINASE-LIKE PROTEIN ACR4 26 918 - -
Dere07g1089 918 MobiDBLite consensus disorder prediction 822 847 - -
Dere07g1089 918 Gene3D Phosphorylase Kinase; domain 1 491 598 - -
Dere07g1089 918 Gene3D Transferase(Phosphotransferase) domain 1 599 807 - -
Dere07g1089 918 ProSiteProfiles Protein kinase domain profile. 521 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
Dere07g1089 918 FunFam serine/threonine-protein kinase-like protein CCR1 491 598 - -
Dere07g1089 918 ProSitePatterns Serine/Threonine protein kinases active-site signature. 646 658 IPR008271 GO:0004672|GO:0006468
Dere07g1089 918 SUPERFAMILY RCC1/BLIP-II 42 243 IPR009091 -
Dere07g1089 918 SMART serkin_6 521 799 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1089 Dere-ChrDere07 14315363 14318119 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1089 29 918 Receptor kinase-like Gene Family AT3G59420 71.014 0.0 1289
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CR4L Dere07g1089 PK_Tyr_Ser-Thr 3.1e-44 CL0016