Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1056 ATGGAGTCAGATCTTGAACAGCACTCTTCGACGTTACCTGGTCATCAGCAGCAACAGATGAATTCTGGGTTGACACGGTACCGATCGGCACCGAGCTCATATTTTACGAGTATCATTGACAAGGAATTCTATGAGGACATGTTCAATCGGCCTTCAAGCCCCGAAACAGAGCGAGTTTTTTCACGGTTTATGAATAGCCTTGCTAATGACGCAGAAGATTCTCCCGCTCAGTATCTCTCACCTGTTCGACAAAATTCTGCAGTGAAGGAAGAGATGAATCAGCAGCCTCAGGTTATGCCTTCCATGAACAATGAACCCGTGGTTCTCCAGCAACATCAGCCCAACACTGTTAGTAATTTTGCTTCTGCTTCTCATAATCTTTACCAAAGCTCAGGGCGTCCACCTTTGCCGAATCAGAGCCTCACCTCATCAGCTATGGAAGGAGCCTATTCCATGGGAGTTCATCGATTGTCCCATATGAAGACTGGTGATGGACATACTTCCAATCTAATCAGGCATAATAGCTCACCTGCAGGACTCTTTTCCGCCATAAACATTGAAAGTGGCTATGCTGCTATGAGAGGCACAGGGATTGTGGGAGCTGGTAATAACACTAGCGAAGAAGCAAACTATTCTCCTGCGATGAGGTTGAAGAAACCACCAACATACTCCACAAACCTAATGTCCTCCATAGCCGAAATTGGGGACAAAGGCAACGCAGAAAATAATCAAGATAGTGAATCTTTTGCTGAAAGCCACGGTAATGAGTTTATCCCTGGTTTCGCCGCAGGACCTTGGGATGATTCTGCAATTATGTCTGACAATATTGATGGACTAAATAGATATAGAGATGAGGATGCAAAAACATTTTCTGAGACTCAGAATGAGACAGGAAGCCAGCCTCGTCCTGCTCCTTTGGCTCATCACCTGAGTTTGCCAAAGACTTCAGCGGAAATGGCAGCCATTGAAAAGTTTCTGCAGTTTTCAGATTCTGTTCCCTGTAAGATTCGTGCCAAGAGAGGCTGTGCCACTCATCCAAGAAGCATTGCTGAGAGGGTTAGAAGAACTAAAATCAGTGAGCGTATGAGGAAACTGCAAGATCTGGTCCCCAACATGGACAAACAAACGAACACAGCAGACATGTTGGACTTGGCCGTCGACTACATTAAAGACCTTCAAAAGCAGGTTCAGACGCTTTCAGACAGTCACGCGAAGTGCACGTGTTCACACAAGCAGAGTCAATGA 1245 0.457 MESDLEQHSSTLPGHQQQQMNSGLTRYRSAPSSYFTSIIDKEFYEDMFNRPSSPETERVFSRFMNSLANDAEDSPAQYLSPVRQNSAVKEEMNQQPQVMPSMNNEPVVLQQHQPNTVSNFASASHNLYQSSGRPPLPNQSLTSSAMEGAYSMGVHRLSHMKTGDGHTSNLIRHNSSPAGLFSAINIESGYAAMRGTGIVGAGNNTSEEANYSPAMRLKKPPTYSTNLMSSIAEIGDKGNAENNQDSESFAESHGNEFIPGFAAGPWDDSAIMSDNIDGLNRYRDEDAKTFSETQNETGSQPRPAPLAHHLSLPKTSAEMAAIEKFLQFSDSVPCKIRAKRGCATHPRSIAERVRRTKISERMRKLQDLVPNMDKQTNTADMLDLAVDYIKDLQKQVQTLSDSHAKCTCSHKQSQ 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1056 414 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 342 392 IPR011598 GO:0046983
Dere07g1056 414 SMART finulus 348 398 IPR011598 GO:0046983
Dere07g1056 414 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 345 406 IPR036638 GO:0046983
Dere07g1056 414 Pfam Helix-loop-helix DNA-binding domain 347 393 IPR011598 GO:0046983
Dere07g1056 414 Gene3D - 343 413 IPR036638 GO:0046983
Dere07g1056 414 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 38 411 - -
Dere07g1056 414 MobiDBLite consensus disorder prediction 1 24 - -
Dere07g1056 414 FunFam Transcription factor bHLH130 family 343 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1056 Dere-ChrDere07 13956270 13958590 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1056 1 409 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G51140 43.128 6.86e-85 262
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Dere07g1056 HLH 5.4e-10 No_clan