Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1046 ATGGGCTCAATGAACTCGAACAACTGGCTCTCCTTCCCTCTTTCCCCCACTCATTCTTCCTTGCCCCCACAACTCCAAGCCACTCAGTCCCATCAGTTTTCTCTTGGCTTAGTCAATGATTCCATGGAAAACCCGTTCCAAAACCACGATTGGAATCTGATGAATACCCATAGCAGCAACGTTAATGAAGTTCCGAAGGTTGCAGATTTTCTAGGAGTGGGAAAGTCTGAGAATCAGTCAGATCTTGCAGCCTTTAATGAAATTCAGTCAAATGATTCCGGCTATCTATTCACAAACAACAGTCTGGTGCCGATGCAAAGCTCAGTAGTGGCCACATCTGGCAACTTCGAATATCAAGAAAATAATGCTAATACTAACTTGCAGTCGTTGACGTTATCCATGGGTAGTGGTAAGGATTCTACATGTGAAACTAGTGGTGACAATAGTACTAATACTGCTGTCGAAGCTGCTGCACCTAGAAGAACTTTGGATACATTCGGTCAGAGAACATCAATTTATCGAGGTGTAACAAGACATAGATGGACTGGAAGGTATGAAGCTCATCTTTGGGATAACAGTTGTAGAAGGGAAGGGCAATCAAGAAAGGGACGCCAAGGTGGGTATGACAAAGAAGAGAAAGCAGCTAGGGCCTACGATTTAGCAGCACTAAAGTATTGGGGAACATCCACAACTACCAACTTTCCGATCAATAACTATGAGAAGGAATTGGAGGAGATGAAGCACATGACAAGACAAGAATTTGTTGCCGCCATACGAAGGAAGAGCAGTGGGTTCTCTCGGGGTGCCTCAATGTATCGCGGAGTCACAAGGCATCACCAACATGGTAGATGGCAAGCGAGGATCGGTAGAGTTGCAGGAAACAAAGATCTTTACTTGGGAACTTTCAGTACTGAGGAAGAAGCTGCAGAAGCATATGACATAGCAGCGATAAAGTTCAGAGGATTAAACGCAGTGACAAATTTTGACATGAGCCGTTACGACGTGAAAGCCATACTTGAAAGCAACACGCTTCCGATCGGAGGTGGAGCAGCGAAACGACTGAAGGAAGCTCAAGCTCTGGAGTGTTCGAGAAAAAGAGAGGAAATGATAGCACTTGGGTCGACTTTTCAGTACGGAAGCGGCAGCGGCAGCGGCGGCAGCAGCGGCTCCAGCAGGCTACAACTACAAGCTTACCCTCTCATGCAGTTGGATCAGACGCAGCCATTGTTAAGCTTACAGAACCAGGAGATATCTCAGTACTCTTCACTTCATCATCCGAGTTATATACAGACCCAGCTTCAGTTGCACCAAAGTGGTTCTTCGAATTATAACTTTCACCAATCTCCTAACAATAACGCTCAGTTGTACAATAGTTACCTTCAGAACCACCCGGCTTTGCTTCAGGGCTTGATGAACATGGGATCTTGTTCTTCTTCTGTGATGGACAATGATGGAGGGTCTAGTGGGAGCTACAGTGGAGGAGGGTATATGGGGATGGCGTCGAATACGACGTCGGTGGGATCCGCCGAGGAACTGGCGATGGTGAAGGTCGAAAATTATAACATGCCGTCGGGGGGTTACGGTGGCTGGCCGGCGGAGTCCATGCAGGGATCTAATGCTGCACTTTTTACTATGTGGAATGACTGA 1647 0.4675 MGSMNSNNWLSFPLSPTHSSLPPQLQATQSHQFSLGLVNDSMENPFQNHDWNLMNTHSSNVNEVPKVADFLGVGKSENQSDLAAFNEIQSNDSGYLFTNNSLVPMQSSVVATSGNFEYQENNANTNLQSLTLSMGSGKDSTCETSGDNSTNTAVEAAAPRRTLDTFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRKGRQGGYDKEEKAARAYDLAALKYWGTSTTTNFPINNYEKELEEMKHMTRQEFVAAIRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEAAEAYDIAAIKFRGLNAVTNFDMSRYDVKAILESNTLPIGGGAAKRLKEAQALECSRKREEMIALGSTFQYGSGSGSGGSSGSSRLQLQAYPLMQLDQTQPLLSLQNQEISQYSSLHHPSYIQTQLQLHQSGSSNYNFHQSPNNNAQLYNSYLQNHPALLQGLMNMGSCSSSVMDNDGGSSGSYSGGGYMGMASNTTSVGSAEELAMVKVENYNMPSGGYGGWPAESMQGSNAALFTMWND 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1046 548 ProSiteProfiles AP2/ERF domain profile. 271 329 IPR001471 GO:0003700|GO:0006355
Dere07g1046 548 SUPERFAMILY DNA-binding domain 171 237 IPR016177 GO:0003677
Dere07g1046 548 PRINTS Ethylene responsive element binding protein signature 173 184 IPR001471 GO:0003700|GO:0006355
Dere07g1046 548 PRINTS Ethylene responsive element binding protein signature 311 331 IPR001471 GO:0003700|GO:0006355
Dere07g1046 548 SMART rav1_2 271 335 IPR001471 GO:0003700|GO:0006355
Dere07g1046 548 SMART rav1_2 172 241 IPR001471 GO:0003700|GO:0006355
Dere07g1046 548 SUPERFAMILY DNA-binding domain 270 331 IPR016177 GO:0003677
Dere07g1046 548 ProSiteProfiles AP2/ERF domain profile. 172 235 IPR001471 GO:0003700|GO:0006355
Dere07g1046 548 Gene3D AP2/ERF domain 172 237 IPR036955 GO:0003700|GO:0006355
Dere07g1046 548 Gene3D AP2/ERF domain 271 331 IPR036955 GO:0003700|GO:0006355
Dere07g1046 548 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 66 421 - -
Dere07g1046 548 Pfam AP2 domain 172 227 IPR001471 GO:0003700|GO:0006355
Dere07g1046 548 Pfam AP2 domain 272 321 IPR001471 GO:0003700|GO:0006355
Dere07g1046 548 CDD AP2 270 331 IPR001471 GO:0003700|GO:0006355
Dere07g1046 548 FunFam AP2-like ethylene-responsive transcription factor 270 331 - -
Dere07g1046 548 FunFam AP2-like ethylene-responsive transcription factor ANT 171 237 - -
Dere07g1046 548 CDD AP2 171 237 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1046 Dere-ChrDere07 13886585 13889290 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1046 4 548 AP2-EREBP Transcription Factor Family AT3G20840 64.983 0.0 665
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Dere07g1046 AP2 2.5e-09 CL0081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere07g1046 07 13886585 13889290 Dere07g1046 07 13886585 13889290 ECH