Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Dere07g1043 ATGAACATGTGTTCTAAGTGCCACAAAGACATGATGCTGAAACAGGAGCAGGCCAAGCTTGCAGCATCGTCCATTGGCAATATTATGAATGGGTCATCAAGCAGCAGTGGAAATGAACCTGTTGTTTCTGCAAATGTTGATATAACAGTCAATTCAGTGGAGCCTGAAACTATATCTGCAGAACCTTTTCTTGCTTCAGGCTCAAAGGAGAGTGGTGAGGCAAAGCCGAAGGATGGACCCAAACGCTGCAGCAGCTGCAATAAGCGGGTTGGTTTGACAGGTTTCAATTGCCGATGTGGTAACCTTTTCTGTGCTGTGCATCGCTACTCAGACAAGCATGATTGCCCCTTTGATTACCGCACTGCTGCACGGGATGCCATAGCTAAAGCAAATCCAGTTGTTAAGGCTGAGAAGCTTGATAAGATCTAG 429 0.4615 MNMCSKCHKDMMLKQEQAKLAASSIGNIMNGSSSSSGNEPVVSANVDITVNSVEPETISAEPFLASGSKESGEAKPKDGPKRCSSCNKRVGLTGFNCRCGNLFCAVHRYSDKHDCPFDYRTAARDAIAKANPVVKAEKLDKI 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Dere07g1043 142 Pfam AN1-like Zinc finger 83 119 IPR000058 GO:0008270
Dere07g1043 142 Gene3D - 1 40 - -
Dere07g1043 142 SMART AN1_Zf_4 83 120 IPR000058 GO:0008270
Dere07g1043 142 FunFam Zinc finger AN1-type containing 6 57 138 - -
Dere07g1043 142 SUPERFAMILY AN1-like Zinc finger 68 137 IPR035896 -
Dere07g1043 142 PANTHER AN1-TYPE ZINC FINGER PROTEIN 1 142 - -
Dere07g1043 142 MobiDBLite consensus disorder prediction 59 83 - -
Dere07g1043 142 ProSiteProfiles Zinc finger AN1-type profile. 77 123 IPR000058 GO:0008270
Dere07g1043 142 Gene3D - 60 138 IPR035896 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Dere07g1043 Dere-ChrDere07 13878235 13878663 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Dere07g1043 71 142 C2H2 Transcription Factor Family AT3G52800 56.944 1.31e-27 99.0
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Dere07g1043 07 13878235 13878663 Dere07g1043 07 13878235 13878663 ECH